RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 TEAD2Q15562 447 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 BSPRYQ5W0U4 402 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 HFE2Q6ZVN8 426 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 H2AFVQ71UI9 128 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 RSRC2Q7L4I2 434 aaKnown RBP15.97■□□□□ 0.15
TPM1-206ENST00000358278 SLC26A9Q7LBE3 791 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 SCD5Q86SK9 330 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 C3orf20Q8ND61 904 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 ITFG1Q8TB96 612 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 CTNNBL1Q8WYA6 563 aaPredicted RBP15.97■□□□□ 0.15
TPM1-206ENST00000358278 MCRS1Q96EZ8 462 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 NACA2Q9H009 215 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 THAP2Q9H0W7 228 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 POMKQ9H5K3 350 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 ABCC13Q9NSE7 274 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 MYO1AQ9UBC5 1043 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 CAPN9O14815 690 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 MBTPS2O43462 519 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 TLR5O60602 858 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 GLI1P08151 1106 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 SCNN1AP37088 669 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 RNASE9P60153 205 aaKnown RBP15.97■□□□□ 0.15
TPM1-206ENST00000358278 YWHAZP63104 245 aaKnown RBP15.97■□□□□ 0.15
TPM1-206ENST00000358278 HECTD3Q5T447 861 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 GPR158Q5T848 1215 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 SNX30Q5VWJ9 437 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 MAB21L3Q8N8X9 362 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 SUSD6Q92537 303 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 EDEM1Q92611 657 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 PACSIN1Q9BY11 444 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 POPDC2Q9HBU9 364 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 PARVAQ9NVD7 372 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 ASNSD1Q9NWL6 643 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 OSER1Q9NX31 292 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 CLIC5Q9NZA1 410 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 SCINQ9Y6U3 715 aa15.97■□□□□ 0.15
TPM1-206ENST00000358278 C2orf78A6NCI8 922 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 GRXCR2A6NFK2 248 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 NRG2O14511 850 aaPredicted RBP15.96■□□□□ 0.15
TPM1-206ENST00000358278 MOSPD3O75425 235 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 KRT3P12035 628 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 NCAM1P13591 858 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 RARGP13631 454 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 DDX6P26196 483 aaKnown RBP eCLIP15.96■□□□□ 0.15
TPM1-206ENST00000358278 MAGEA1P43355 309 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 TUBP50607 506 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 GPC5P78333 572 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 KRT83P78385 493 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 TAF5Q15542 800 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 LEXMQ3ZCV2 418 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 STXBP5Q5T5C0 1151 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 TXNDC8Q6A555 127 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 TADA2BQ86TJ2 420 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 ACRBPQ8NEB7 543 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 RNF139Q8WU17 664 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 CDK5RAP1Q96SZ6 601 aaKnown RBP15.96■□□□□ 0.15
TPM1-206ENST00000358278 DESI2Q9BSY9 194 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 CCSER2Q9H7U1 834 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 MRPL47Q9HD33 250 aaKnown RBP15.96■□□□□ 0.15
TPM1-206ENST00000358278 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.96■□□□□ 0.153e-7■■■□□ 15.3
TPM1-206ENST00000358278 PCDHA13Q9Y5I0 950 aa15.96■□□□□ 0.15
TPM1-206ENST00000358278 TRAV19A0A0A6YYK7 116 aa15.95■□□□□ 0.14
TPM1-206ENST00000358278 DAB1O75553 588 aa15.95■□□□□ 0.14
TPM1-206ENST00000358278 CKMP06732 381 aa15.95■□□□□ 0.14
TPM1-206ENST00000358278 C10orf120Q5SQS8 335 aa15.95■□□□□ 0.14
TPM1-206ENST00000358278 DCUN1D2Q6PH85 259 aa15.95■□□□□ 0.14
TPM1-206ENST00000358278 KIAA1328Q86T90 577 aa15.95■□□□□ 0.14
TPM1-206ENST00000358278 MCEEQ96PE7 176 aa15.95■□□□□ 0.14
TPM1-206ENST00000358278 PRDM6Q9NQX0 595 aa15.95■□□□□ 0.14
TPM1-206ENST00000358278 ZMYM5Q9UJ78 669 aa15.95■□□□□ 0.14
TPM1-206ENST00000358278 NUDT5Q9UKK9 219 aa15.95■□□□□ 0.14
TPM1-206ENST00000358278 GJB6O95452 261 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 OAS1P00973 400 aaKnown RBP15.94■□□□□ 0.14
TPM1-206ENST00000358278 TMEM253P0C7T8 217 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 GBP2P32456 591 aaPredicted RBP15.94■□□□□ 0.14
TPM1-206ENST00000358278 TFF2Q03403 129 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 DCAF6Q58WW2 860 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 PLEKHA7Q6IQ23 1121 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 NPAS3Q8IXF0 933 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 FGF13Q92913 245 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 ZNF830Q96NB3 372 aaPredicted RBP15.94■□□□□ 0.14
TPM1-206ENST00000358278 KCNF1Q9H3M0 494 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 TASP1Q9H6P5 420 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 OLA1Q9NTK5 396 aaKnown RBP15.94■□□□□ 0.14
TPM1-206ENST00000358278 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.94■□□□□ 0.14
TPM1-206ENST00000358278 THEGQ9P2T0 379 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 INTUQ9ULD6 942 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 NAALADL1Q9UQQ1 740 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 FAM50BQ9Y247 325 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 TCF20Q9UGU0 1960 aaKnown RBP15.94■□□□□ 0.14
TPM1-206ENST00000358278 MYO10Q9HD67 2058 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 SIGLEC16A6NMB1 481 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 COCHO43405 550 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 HDCP19113 662 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 ATP5C1P36542 298 aaKnown RBP15.94■□□□□ 0.14
TPM1-206ENST00000358278 AVPR1AP37288 418 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 MAMLD1Q13495 774 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 PTCRAQ6ISU1 281 aaPredicted RBP15.94■□□□□ 0.14
TPM1-206ENST00000358278 DEFB106AQ8N104 65 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 TXLNBQ8N3L3 684 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms