RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 CILPO75339 1184 aa16.82■□□□□ 0.28
IFT20-202ENST00000357896 TACC1O75410 805 aa16.82■□□□□ 0.28
IFT20-202ENST00000357896 GCNT3O95395 438 aa16.82■□□□□ 0.28
IFT20-202ENST00000357896 BMP15O95972 392 aa16.82■□□□□ 0.28
IFT20-202ENST00000357896 PTPN1P18031 435 aaKnown RBP16.82■□□□□ 0.28
IFT20-202ENST00000357896 ALCAMQ13740 583 aa16.82■□□□□ 0.28
IFT20-202ENST00000357896 GPD1LQ8N335 351 aa16.82■□□□□ 0.28
IFT20-202ENST00000357896 ZCCHC9Q8N567 271 aaKnown RBP16.82■□□□□ 0.28
IFT20-202ENST00000357896 OR6B3Q8NGW1 331 aa16.82■□□□□ 0.28
IFT20-202ENST00000357896 TOE1Q96GM8 510 aaKnown RBP16.82■□□□□ 0.28
IFT20-202ENST00000357896 CBWD1Q9BRT8 395 aa16.82■□□□□ 0.28
IFT20-202ENST00000357896 BBS2Q9BXC9 721 aa16.82■□□□□ 0.28
IFT20-202ENST00000357896 MIR1-1HGQ9H1L0 117 aa16.82■□□□□ 0.28
IFT20-202ENST00000357896 PRDM16Q9HAZ2 1276 aa16.82■□□□□ 0.28
IFT20-202ENST00000357896 TOR4AQ9NXH8 423 aa16.82■□□□□ 0.28
IFT20-202ENST00000357896 WSB2Q9NYS7 404 aaPredicted RBP16.82■□□□□ 0.28
IFT20-202ENST00000357896 KALRNO60229 2985 aa16.82■□□□□ 0.28
IFT20-202ENST00000357896 E9PAM4 449 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 NEDD8-MDP1E9PL57 170 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 BCAT2O15382 392 aaPredicted RBP16.81■□□□□ 0.28
IFT20-202ENST00000357896 ATXN1LP0C7T5 689 aaKnown RBP16.81■□□□□ 0.28
IFT20-202ENST00000357896 NCAM1P13591 858 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 OXTRP30559 389 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 ZNF132P52740 706 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 CACNA2D1P54289 1103 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 STARD3Q14849 445 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 HLA-BQ31612 363 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 HTR3DQ70Z44 454 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 OR5B17Q8NGF7 314 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 ERLEC1Q96DZ1 483 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 MRPL45Q9BRJ2 306 aaKnown RBP16.81■□□□□ 0.28
IFT20-202ENST00000357896 GPR174Q9BXC1 333 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 ZNF518BQ9C0D4 1074 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 SLC6A17Q9H1V8 727 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 PCIF1Q9H4Z3 704 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 IL21RQ9HBE5 538 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 CD93Q9NPY3 652 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 ITM2CQ9NQX7 267 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 OLFML3Q9NRN5 406 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 TBC1D7Q9P0N9 293 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 RAD54BQ9Y620 910 aa16.81■□□□□ 0.28
IFT20-202ENST00000357896 ZNF233A6NK53 670 aa16.8■□□□□ 0.28
IFT20-202ENST00000357896 PRRT4C9JH25 899 aa16.8■□□□□ 0.28
IFT20-202ENST00000357896 H3BQV1 296 aa16.8■□□□□ 0.28
IFT20-202ENST00000357896 PRPF6O94906 941 aaKnown RBP16.8■□□□□ 0.28
IFT20-202ENST00000357896 TYRP14679 529 aa16.8■□□□□ 0.28
IFT20-202ENST00000357896 ABCG1P45844 678 aa16.8■□□□□ 0.28
IFT20-202ENST00000357896 ENGASEQ8NFI3 743 aa16.8■□□□□ 0.28
IFT20-202ENST00000357896 CCSER2Q9H7U1 834 aa16.8■□□□□ 0.28
IFT20-202ENST00000357896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.8■□□□□ 0.28
IFT20-202ENST00000357896 TMEM30AQ9NV96 361 aa16.8■□□□□ 0.28
IFT20-202ENST00000357896 COMMD8Q9NX08 183 aa16.8■□□□□ 0.28
IFT20-202ENST00000357896 MARK1Q9P0L2 795 aa16.8■□□□□ 0.28
IFT20-202ENST00000357896 STK17AQ9UEE5 414 aa16.8■□□□□ 0.28
IFT20-202ENST00000357896 FNDC3AQ9Y2H6 1198 aaKnown RBP16.8■□□□□ 0.28
IFT20-202ENST00000357896 PTPRBP23467 1997 aa16.8■□□□□ 0.28
IFT20-202ENST00000357896 ASXL3Q9C0F0 2248 aa16.8■□□□□ 0.28
IFT20-202ENST00000357896 ATP8B3O60423 1300 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 METTL12A8MUP2 240 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 NPC1O15118 1278 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 DGKGP49619 791 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 GOLGA8FQ08AF8 430 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 GOLGA8DPQ0D2H9 430 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 CAMK2BQ13554 666 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 DCAF12L1Q5VU92 463 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 WDR49Q8IV35 697 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 B3GALNT2Q8NCR0 500 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 LSM14AQ8ND56 463 aaKnown RBP16.79■□□□□ 0.28
IFT20-202ENST00000357896 SLC39A7Q92504 469 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 B3GNT5Q9BYG0 378 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 IL37Q9NZH6 218 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 USP36Q9P275 1121 aaKnown RBP16.79■□□□□ 0.28
IFT20-202ENST00000357896 CCDC39Q9UFE4 941 aa16.79■□□□□ 0.28
IFT20-202ENST00000357896 PTPRJQ12913 1337 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 GOLGA8CPA6NN73 597 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 A8MXQ7 604 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 TNFSF14O43557 240 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 ZDHHC11BP0C7U3 371 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 IRF1P10914 325 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 TNNC1P63316 161 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 E2F5Q15329 346 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 SMAD1Q15797 465 aaKnown RBP16.78■□□□□ 0.28
IFT20-202ENST00000357896 FUT11Q495W5 492 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 TPGS1Q6ZTW0 290 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 SV2BQ7L1I2 683 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 TRAPPC11Q7Z392 1133 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 SCAMP5Q8TAC9 235 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 DCBLD2Q96PD2 775 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 KCNK16Q96T55 309 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 NUP58Q9BVL2 599 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 KIAA1586Q9HCI6 787 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 LSM7Q9UK45 103 aaKnown RBP16.78■□□□□ 0.28
IFT20-202ENST00000357896 STON1Q9Y6Q2 735 aa16.78■□□□□ 0.28
IFT20-202ENST00000357896 FAM92AA1XBS5 289 aa16.77■□□□□ 0.28
IFT20-202ENST00000357896 WASH3PC4AMC7 463 aa16.77■□□□□ 0.28
IFT20-202ENST00000357896 CLDN5O00501 218 aa16.77■□□□□ 0.28
IFT20-202ENST00000357896 ATXN7O15265 892 aaPredicted RBP16.77■□□□□ 0.28
IFT20-202ENST00000357896 HLA-EP13747 358 aa16.77■□□□□ 0.28
IFT20-202ENST00000357896 TPMTP51580 245 aa16.77■□□□□ 0.28
IFT20-202ENST00000357896 AFF3P51826 1226 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms