RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 FAM110CQ1W6H9 321 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 ARHGAP17Q68EM7 881 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 LVRNQ6Q4G3 990 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 CCDC33Q8N5R6 958 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 FITM2Q8N6M3 262 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 LRRC8CQ8TDW0 803 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 TBCBQ99426 244 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 MAGEB5Q9BZ81 275 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 RNF39Q9H2S5 420 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 SMIM28A0A1B0GU29 152 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 SMIM35A0A1B0GVV1 85 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 A6NJR5 290 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 SNX16P57768 344 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 ZNF200P98182 395 aaPredicted RBP16.47■□□□□ 0.23
PHTF1-201ENST00000357783 SLC9A4Q6AI14 798 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 PNMA8AQ86V59 439 aaPredicted RBP16.47■□□□□ 0.23
PHTF1-201ENST00000357783 CFAP36Q96G28 342 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 PLCD4Q9BRC7 762 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 DHX35Q9H5Z1 703 aaKnown RBP16.47■□□□□ 0.23
PHTF1-201ENST00000357783 ECT2Q9H8V3 914 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 PHTF1Q9UMS5 762 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 TCRBV9S1A1TA0A576 114 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 CHADO15335 359 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 CYP2F1P24903 491 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 GNL1P36915 607 aaPredicted RBP16.47■□□□□ 0.23
PHTF1-201ENST00000357783 BCAT1P54687 386 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 BST2Q10589 180 aaKnown RBP16.47■□□□□ 0.23
PHTF1-201ENST00000357783 MFSD10Q14728 455 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 GALNTL6Q49A17 601 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 TBC1D1Q86TI0 1168 aaPredicted RBP16.47■□□□□ 0.23
PHTF1-201ENST00000357783 ECHDC2Q86YB7 292 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 PARP9Q8IXQ6 854 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 AGGF1Q8N302 714 aaeCLIP16.47■□□□□ 0.23
PHTF1-201ENST00000357783 CCDC110Q8TBZ0 833 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 MZB1Q8WU39 189 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 GRAMD1AQ96CP6 724 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 CYTH2Q99418 400 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 ZNF670Q9BS34 389 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 SNX25Q9H3E2 840 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 C12orf65Q9H3J6 166 aaKnown RBP16.47■□□□□ 0.23
PHTF1-201ENST00000357783 NRDE2Q9H7Z3 1164 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 TEX264Q9Y6I9 313 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 KPNA7A9QM74 516 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 MDM4O15151 490 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 NCALDP61601 193 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 CDC42EP1Q00587 391 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 SNX17Q15036 470 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 TLK2Q86UE8 772 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 ZDHHC17Q8IUH5 632 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 ANKRD52Q8NB46 1076 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 STK32AQ8WU08 396 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 USP6NLQ92738 828 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 CPA4Q9UI42 421 aa16.47■□□□□ 0.23
PHTF1-201ENST00000357783 MBLAC1A4D2B0 266 aaPredicted RBP16.46■□□□□ 0.23
PHTF1-201ENST00000357783 SLC15A5A6NIM6 579 aa16.46■□□□□ 0.23
PHTF1-201ENST00000357783 PIRO00625 290 aa16.46■□□□□ 0.23
PHTF1-201ENST00000357783 TREHO43280 583 aa16.46■□□□□ 0.23
PHTF1-201ENST00000357783 APRTP07741 180 aa16.46■□□□□ 0.23
PHTF1-201ENST00000357783 ADRA1DP25100 572 aa16.46■□□□□ 0.23
PHTF1-201ENST00000357783 YWHAZP63104 245 aaKnown RBP16.46■□□□□ 0.23
PHTF1-201ENST00000357783 GBE1Q04446 702 aa16.46■□□□□ 0.23
PHTF1-201ENST00000357783 SEPT7Q16181 437 aaKnown RBP16.46■□□□□ 0.23
PHTF1-201ENST00000357783 KBTBD12Q3ZCT8 623 aa16.46■□□□□ 0.23
PHTF1-201ENST00000357783 OLFML2BQ68BL8 750 aa16.46■□□□□ 0.23
PHTF1-201ENST00000357783 SLC2A14Q8TDB8 520 aa16.46■□□□□ 0.23
PHTF1-201ENST00000357783 RXFP1Q9HBX9 757 aa16.46■□□□□ 0.23
PHTF1-201ENST00000357783 SLC5A4Q9NY91 659 aa16.46■□□□□ 0.23
PHTF1-201ENST00000357783 GNEQ9Y223 722 aaKnown RBP16.46■□□□□ 0.23
PHTF1-201ENST00000357783 WDR91A4D1P6 747 aa16.46■□□□□ 0.22
PHTF1-201ENST00000357783 ZWINTO95229 277 aa16.46■□□□□ 0.22
PHTF1-201ENST00000357783 CD4P01730 458 aa16.46■□□□□ 0.22
PHTF1-201ENST00000357783 TSHRP16473 764 aa16.46■□□□□ 0.22
PHTF1-201ENST00000357783 SOX4Q06945 474 aaPredicted RBP16.46■□□□□ 0.22
PHTF1-201ENST00000357783 SPRYD7Q5W111 196 aa16.46■□□□□ 0.22
PHTF1-201ENST00000357783 RNF43Q68DV7 783 aa16.46■□□□□ 0.22
PHTF1-201ENST00000357783 SLC26A9Q7LBE3 791 aa16.46■□□□□ 0.22
PHTF1-201ENST00000357783 GBP7Q8N8V2 638 aaPredicted RBP16.46■□□□□ 0.22
PHTF1-201ENST00000357783 RTP4Q96DX8 246 aa16.46■□□□□ 0.22
PHTF1-201ENST00000357783 AP4E1Q9UPM8 1137 aa16.46■□□□□ 0.22
PHTF1-201ENST00000357783 STARD13Q9Y3M8 1113 aa16.46■□□□□ 0.22
PHTF1-201ENST00000357783 IKBKGQ9Y6K9 419 aa16.46■□□□□ 0.22
PHTF1-201ENST00000357783 BCLAF3A2AJT9 711 aaKnown RBP16.45■□□□□ 0.22
PHTF1-201ENST00000357783 CFAP69A5D8W1 941 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 UNCXA6NJT0 531 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 L1CAMP32004 1257 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 PTPN9P43378 593 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 ELF3P78545 371 aaPredicted RBP16.45■□□□□ 0.22
PHTF1-201ENST00000357783 BNIP1Q12981 228 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 PTK7Q13308 1070 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 RGS9BPQ6ZS82 235 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 CCDC185Q8N715 623 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 TCP10LQ8TDR4 215 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 ZNF560Q96MR9 790 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 KLC2Q9H0B6 622 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 CD248Q9HCU0 757 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 SSU72Q9NP77 194 aaKnown RBP16.45■□□□□ 0.22
PHTF1-201ENST00000357783 ETNK2Q9NVF9 386 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 FLRT1Q9NZU1 646 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 SLC17A7Q9P2U7 560 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 CENPFP49454 3210 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms