RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 TPBGLP0DKB5 382 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 VDRP11473 427 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 ATP6V1C1P21283 382 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 MGAT5Q09328 741 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 CCDC15Q0P6D6 951 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 TTLL4Q14679 1199 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 DBN1Q16643 649 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 DPP9Q86TI2 863 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 USP33Q8TEY7 942 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 C7orf43Q8WVR3 580 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 SERAC1Q96JX3 654 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 FBXL18Q96ME1 805 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 SERPINI1Q99574 410 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 CADM1Q9BY67 442 aaKnown RBP7.08□□□□□ -1.28
RTN4-203ENST00000357376 FRMD8P1Q9BZ68 369 aaPredicted RBP7.08□□□□□ -1.28
RTN4-203ENST00000357376 UNKQ9C0B0 810 aaKnown RBP7.08□□□□□ -1.28
RTN4-203ENST00000357376 DPP3Q9NY33 737 aa7.08□□□□□ -1.28
RTN4-203ENST00000357376 DPPA5A6NC42 116 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 MAGEA13PA6NCF6 341 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 KPNA7A9QM74 516 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 GSC2O15499 205 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 USP12O75317 370 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 USP1O94782 785 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 APOEP02649 317 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 GSTA2P09210 222 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 IL1R2P27930 398 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 RXRBP28702 533 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 SERPINB5P36952 375 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 KLF1Q13351 362 aaPredicted RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 ITGA9Q13797 1035 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 SH3PXD2AQ5TCZ1 1133 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 C4orf50Q6ZRC1 276 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 GALNT4Q8N4A0 578 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 MIPOL1Q8TD10 442 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 MMP19Q99542 508 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 NTPCRQ9BSD7 190 aaKnown RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 STRA6Q9BX79 667 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 GCOM2Q9BZD3 368 aaPredicted RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 ASCC2Q9H1I8 757 aaPredicted RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 SMARCAD1Q9H4L7 1026 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 PRMT7Q9NVM4 692 aaPredicted RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 EME2A4GXA9 379 aaPredicted RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 PPP1R12AO14974 1030 aaPredicted RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 PMM2O15305 246 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 TBC1D12O60347 775 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 PEX11AO75192 247 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 LYPLA1O75608 230 aaPredicted RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 TCEA3O75764 348 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 TRUB2O95900 331 aaKnown RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 ZFXP17010 805 aaPredicted RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 PTPRAP18433 802 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 GLRBP48167 497 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 PAPOLAP51003 745 aaKnown RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 GPX6P59796 221 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 KCNT2Q6UVM3 1135 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 RINLQ6ZS11 566 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 ANKS1BQ7Z6G8 1248 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 RYBPQ8N488 228 aaPredicted RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 AFAP1L2Q8N4X5 818 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 RNF148Q8N7C7 305 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 STKLD1Q8NE28 680 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 BEST2Q8NFU1 509 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 PPP1R13LQ8WUF5 828 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 COPS5Q92905 334 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 TMA16Q96EY4 203 aaKnown RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 ZNF184Q99676 751 aaPredicted RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 SIK2Q9H0K1 926 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 ANLNQ9NQW6 1124 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 SLC5A4Q9NY91 659 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 IL1RAPL1Q9NZN1 696 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 KLK14Q9P0G3 267 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 AP4E1Q9UPM8 1137 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 SCN7AQ01118 1682 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 KAT6AQ92794 2004 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 KCNK1O00180 336 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 GRIN3BO60391 1043 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 HUS1O60921 280 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 PROCP04070 461 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 ZBTB48P10074 688 aaPredicted RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 ATP6V1B1P15313 513 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 ACO1P21399 889 aaKnown RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 AMPD1P23109 780 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 NUDT2P50583 147 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 RTP1P59025 263 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 BTKQ06187 659 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 PRPSAP1Q14558 356 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 RPS6KA2Q15349 733 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 CNGA3Q16281 694 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 FKBP1CQ5VVH2 108 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 ADGRD1Q6QNK2 874 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 METTL7BQ6UX53 244 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 RIPOR1Q6ZS17 1223 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 FAM183BPQ6ZVS7 135 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 ACAD11Q709F0 780 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.07□□□□□ -1.281e-6■■■■■ 116
RTN4-203ENST00000357376 DEFB107AQ8IZN7 70 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 CHST13Q8NET6 341 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 TFB1MQ8WVM0 346 aaKnown RBP7.07□□□□□ -1.28
RTN4-203ENST00000357376 SGF29Q96ES7 293 aa7.07□□□□□ -1.28
RTN4-203ENST00000357376 ACO2Q99798 780 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms