RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 SETSIPP0DME0 302 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 ALOX15P16050 662 aaPredicted RBP12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 DESP17661 470 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 IL1R2P27930 398 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 COPAP53621 1224 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 CACNB3P54284 484 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 TCP10Q12799 353 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 TRIP10Q15642 601 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 ICA1LQ8NDH6 482 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 POPDC2Q9HBU9 364 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 KMT5AQ9NQR1 393 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 SMYD2Q9NRG4 433 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 RAB26Q9ULW5 256 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 ARHGAP42A6NI28 874 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 PLA2G6O60733 806 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 SIN3BO75182 1162 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 GH2P01242 217 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 KITP10721 976 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 ITGAXP20702 1163 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 KDELR1P24390 212 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 MTTPP55157 894 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 MYLK3Q32MK0 819 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 ZFYVE27Q5T4F4 411 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 DNAJC24Q6P3W2 148 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 MAVSQ7Z434 540 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 XAB2Q9HCS7 855 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 C6orf203Q9P0P8 240 aaPredicted RBP12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 LZTS1Q9Y250 596 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 STYXL1Q9Y6J8 313 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 COL2A1P02458 1487 aaPredicted RBP12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 BRCA1P38398 1863 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 H0YIN7 160 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 APOC4-APOC2K7ER74 178 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 APOC2P02655 101 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 TBXAS1P24557 533 aaPredicted RBP12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 ACAT1P24752 427 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 FKBP1AP62942 108 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 GHRHRQ02643 423 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 STX3Q13277 289 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 TKFCQ3LXA3 575 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 MBLAC2Q68D91 279 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 DUS1LQ6P1R4 473 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 FBXW8Q8N3Y1 598 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 WDTC1Q8N5D0 677 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 FAM71DQ8N9W8 422 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 IL31RAQ8NI17 732 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 PIWIL2Q8TC59 973 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 RILPQ96NA2 401 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 SUDS3Q9H7L9 328 aaPredicted RBP12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 COL20A1Q9P218 1284 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 PADI4Q9UM07 663 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 INPP5FQ9Y2H2 1132 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 PCDHAC2Q9Y5I4 1007 aa12.56□□□□□ -0.4
SMARCAL1-201ENST00000357276 SCN4AP35499 1836 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 ZNF195O14628 629 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 FBXO21O94952 628 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 MYL4P12829 197 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 CPA3P15088 417 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 YWHAZP63104 245 aaKnown RBP12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 MYBPC1Q00872 1141 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 CNTN2Q02246 1040 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 TEDDM1Q5T9Z0 273 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 TIFABQ6ZNK6 161 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 ADGRF2Q8IZF7 708 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 KCNN1Q92952 543 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 PDLIM7Q9NR12 457 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 PCDHGB4Q9UN71 923 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 PCDHGB5Q9Y5G0 923 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 CCDC195A0A1B0GUA6 201 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 CAPN8A6NHC0 703 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 RIMBP2O15034 1052 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 PFDN1O60925 122 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 LRCH4O75427 683 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 PDE5AO76074 875 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 ITGBL1O95965 494 aaPredicted RBP12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 PROCP04070 461 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 TPP2P29144 1249 aaPredicted RBP12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 MAGEA6P43360 314 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 ALDH1A3P47895 512 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 YWHAGP61981 247 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 DYNLT1P63172 113 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 MTMR2Q13614 643 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 LMBRD2Q68DH5 695 aaPredicted RBP12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 ANO5Q75V66 913 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 DCUN1D1Q96GG9 259 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 FRMD8Q9BZ67 464 aaPredicted RBP12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 ZNF518BQ9C0D4 1074 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 SMYD3Q9H7B4 428 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 NRDE2Q9H7Z3 1164 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 DNAJC28Q9NX36 388 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 PSMD13Q9UNM6 376 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 DTNAQ9Y4J8 743 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 NUB1Q9Y5A7 615 aa12.55□□□□□ -0.4
SMARCAL1-201ENST00000357276 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 KRT7P08729 469 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 PCSK6P29122 969 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 PMLP29590 882 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 PRDX6P30041 224 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 SLC5A2P31639 672 aa12.54□□□□□ -0.4
SMARCAL1-201ENST00000357276 BASP1P80723 227 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms