RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 FNBP1LQ5T0N5 605 aa14.48□□□□□ -0.09
LSS-201ENST00000356396 RSPO2Q6UXX9 243 aaPredicted RBP14.48□□□□□ -0.09
LSS-201ENST00000356396 NME8Q8N427 588 aa14.48□□□□□ -0.09
LSS-201ENST00000356396 ANKRD42Q8N9B4 389 aa14.48□□□□□ -0.09
LSS-201ENST00000356396 ANKRD52Q8NB46 1076 aa14.48□□□□□ -0.09
LSS-201ENST00000356396 CCNYQ8ND76 341 aa14.48□□□□□ -0.09
LSS-201ENST00000356396 PLEKHA5Q9HAU0 1116 aa14.48□□□□□ -0.09
LSS-201ENST00000356396 PSTPIP1O43586 416 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 TMEM63AO94886 807 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 CD4P01730 458 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 FYNP06241 537 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 BST2Q10589 180 aaKnown RBP14.47□□□□□ -0.09
LSS-201ENST00000356396 GPS2Q13227 327 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 FAM35AQ86V20 835 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 ECHDC2Q86YB7 292 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 ATL2Q8NHH9 583 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 CRISPLD1Q9H336 500 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 LRRC19Q9H756 370 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 PCYOX1Q9UHG3 505 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 A0A0U1RQF3 1178 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 GRIK1P39086 918 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 SPRED2Q7Z698 418 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 IGDCC3Q8IVU1 814 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 HACE1Q8IYU2 909 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 GIPC2Q8TF65 315 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 RSAD2Q8WXG1 361 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 CAVIN3Q969G5 261 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 RNF34Q969K3 372 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 VCPIP1Q96JH7 1222 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 KCTD15Q96SI1 283 aaPredicted RBP14.47□□□□□ -0.09
LSS-201ENST00000356396 RBM15Q96T37 977 aaKnown RBP eCLIP14.47□□□□□ -0.092e-10■□□□□ 8.4
LSS-201ENST00000356396 STRIP2Q9ULQ0 834 aa14.47□□□□□ -0.09
LSS-201ENST00000356396 ADAM12O43184 909 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 SPAG7O75391 227 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 KCNE1P15382 129 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 NPR3P17342 541 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 RPL22P35268 128 aaKnown RBP14.46□□□□□ -0.09
LSS-201ENST00000356396 CTCFP49711 727 aaPredicted RBP14.46□□□□□ -0.09
LSS-201ENST00000356396 USP46P62068 366 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 ZNF268Q14587 947 aaPredicted RBP14.46□□□□□ -0.09
LSS-201ENST00000356396 PPP2R5DQ14738 602 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 PQLC3Q8N755 202 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 FAM76AQ8TAV0 307 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 ZNF560Q96MR9 790 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 VPS37BQ9H9H4 285 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 TBC1D13Q9NVG8 400 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 DDIT4Q9NX09 232 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.46□□□□□ -0.09
LSS-201ENST00000356396 RASAL2Q9UJF2 1139 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 AP4E1Q9UPM8 1137 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 FAM155BO75949 473 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 TJP3O95049 919 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 ITGB8P26012 769 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 HSPA9P38646 679 aaKnown RBP14.46□□□□□ -0.09
LSS-201ENST00000356396 ABCG1P45844 678 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 HADHQ16836 314 aaKnown RBP14.46□□□□□ -0.09
LSS-201ENST00000356396 TRIM71Q2Q1W2 868 aaKnown RBP14.46□□□□□ -0.09
LSS-201ENST00000356396 FAM171A1Q5VUB5 890 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 OVOS1Q6IE37 1185 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 MIB1Q86YT6 1006 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 LRRC52Q8N7C0 313 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 PLD5Q8N7P1 536 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 CCDC89Q8N998 374 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 GDAP1Q8TB36 358 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 FAM71BQ8TC56 605 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 FAM81BQ96LP2 452 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 CNPY3Q9BT09 278 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 VRTNQ9H8Y1 702 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 PCDH18Q9HCL0 1135 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 ALG13Q9NP73 1137 aaKnown RBP14.46□□□□□ -0.09
LSS-201ENST00000356396 CHMP2BQ9UQN3 213 aa14.46□□□□□ -0.09
LSS-201ENST00000356396 TRDMT1O14717 391 aaKnown RBP14.46□□□□□ -0.1
LSS-201ENST00000356396 MCM3P25205 808 aa14.46□□□□□ -0.1
LSS-201ENST00000356396 PDIA2Q13087 525 aaKnown RBP14.46□□□□□ -0.1
LSS-201ENST00000356396 OTUD1Q5VV17 481 aaPredicted RBP14.46□□□□□ -0.1
LSS-201ENST00000356396 RCOR2Q8IZ40 523 aa14.46□□□□□ -0.1
LSS-201ENST00000356396 PAIP2Q9BPZ3 127 aaKnown RBP14.46□□□□□ -0.1
LSS-201ENST00000356396 SLC4A5Q9BY07 1137 aa14.46□□□□□ -0.1
LSS-201ENST00000356396 ASNSD1Q9NWL6 643 aa14.46□□□□□ -0.1
LSS-201ENST00000356396 CES2O00748 559 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 ALDH1A1P00352 501 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 FAM200BP0CF97 657 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 BCAT1P54687 386 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 CUL1Q13616 776 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 TRAF7Q6Q0C0 670 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 PCSK9Q8NBP7 692 aaKnown RBP14.45□□□□□ -0.1
LSS-201ENST00000356396 BCL7CQ8WUZ0 217 aaPredicted RBP14.45□□□□□ -0.1
LSS-201ENST00000356396 P3H4Q92791 437 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 KCNN1Q92952 543 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.45□□□□□ -0.11e-14■■□□□ 12.5
LSS-201ENST00000356396 FAM114A2Q9NRY5 505 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 NDFIP2Q9NV92 336 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.45□□□□□ -0.11e-10■■□□□ 11.9
LSS-201ENST00000356396 GAS8O95995 478 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 APRTP07741 180 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 MYZAPP0CAP1 466 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 TMEM110Q86TL2 294 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 CIR1Q86X95 450 aaPredicted RBP14.45□□□□□ -0.1
LSS-201ENST00000356396 PLVAPQ9BX97 442 aa14.45□□□□□ -0.1
LSS-201ENST00000356396 RAB6BQ9NRW1 208 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms