RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 NRG2O14511 850 aaPredicted RBP16.29■□□□□ 0.2
TRIM13-201ENST00000356017 HSF2BPO75031 334 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 RARGP13631 454 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 FECHP22830 423 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 ATP5C1P36542 298 aaKnown RBP16.29■□□□□ 0.2
TRIM13-201ENST00000356017 GSCP56915 257 aaPredicted RBP16.29■□□□□ 0.2
TRIM13-201ENST00000356017 STXBP5Q5T5C0 1151 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 MON1BQ7L1V2 547 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 RSRC2Q7L4I2 434 aaKnown RBP16.29■□□□□ 0.2
TRIM13-201ENST00000356017 SLC26A9Q7LBE3 791 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 XYLT1Q86Y38 959 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 ADHFE1Q8IWW8 467 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 MCOLN2Q8IZK6 566 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 ZSCAN18Q8TBC5 510 aaPredicted RBP16.29■□□□□ 0.2
TRIM13-201ENST00000356017 RNF139Q8WU17 664 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 NDRG1Q92597 394 aaKnown RBP16.29■□□□□ 0.2
TRIM13-201ENST00000356017 RPGRIP1Q96KN7 1286 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 MYADMQ96S97 322 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 OSER1Q9NX31 292 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 CAPN9O14815 690 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 OLFM2O95897 454 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 CKMP06732 381 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 MYBL1P10243 752 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 PGFP49763 221 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 PTP4A2Q12974 167 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 CCDC122Q5T0U0 273 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 MTSS1LQ765P7 747 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 SMARCD2Q92925 531 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 E2F7Q96AV8 911 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 ZSWIM3Q96MP5 696 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 ASB16Q96NS5 453 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 BAG1Q99933 345 aaPredicted RBP16.28■□□□□ 0.2
TRIM13-201ENST00000356017 CCSER2Q9H7U1 834 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 TRPV4Q9HBA0 871 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 TAS2R14Q9NYV8 317 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 NOTCH4Q99466 2003 aa16.28■□□□□ 0.2
TRIM13-201ENST00000356017 COCHO43405 550 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 BMP1P13497 986 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 NCAM1P13591 858 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 CYLC1P35663 651 aaPredicted RBP16.27■□□□□ 0.2
TRIM13-201ENST00000356017 SLC7A9P82251 487 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 GFPT1Q06210 699 aaPredicted RBP16.27■□□□□ 0.2
TRIM13-201ENST00000356017 C2CD6Q53TS8 623 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 C10orf120Q5SQS8 335 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 FAM102AQ5T9C2 384 aaPredicted RBP16.27■□□□□ 0.2
TRIM13-201ENST00000356017 ARCQ7LC44 396 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 ARID3BQ8IVW6 561 aaPredicted RBP16.27■□□□□ 0.2
TRIM13-201ENST00000356017 ZDHHC14Q8IZN3 488 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 ARL14EPQ8N8R7 260 aaPredicted RBP16.27■□□□□ 0.2
TRIM13-201ENST00000356017 C3orf20Q8ND61 904 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 NXPE3Q969Y0 559 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 CYP2S1Q96SQ9 504 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 RNF38Q9H0F5 515 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 TDP1Q9NUW8 608 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 DNMT3LQ9UJW3 386 aa16.27■□□□□ 0.2
TRIM13-201ENST00000356017 C2CD4DB7Z1M9 353 aa16.27■□□□□ 0.19
TRIM13-201ENST00000356017 SP100P23497 879 aaPredicted RBP16.27■□□□□ 0.19
TRIM13-201ENST00000356017 DEKP35659 375 aaKnown RBP16.27■□□□□ 0.19
TRIM13-201ENST00000356017 FAM78AQ5JUQ0 283 aa16.27■□□□□ 0.19
TRIM13-201ENST00000356017 C10orf76Q5T2E6 689 aa16.27■□□□□ 0.19
TRIM13-201ENST00000356017 HFE2Q6ZVN8 426 aa16.27■□□□□ 0.19
TRIM13-201ENST00000356017 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.27■□□□□ 0.19
TRIM13-201ENST00000356017 EDEM1Q92611 657 aa16.27■□□□□ 0.19
TRIM13-201ENST00000356017 KIF9Q9HAQ2 790 aa16.27■□□□□ 0.19
TRIM13-201ENST00000356017 ZFP14Q9HCL3 533 aa16.27■□□□□ 0.19
TRIM13-201ENST00000356017 RRN3Q9NYV6 651 aa16.27■□□□□ 0.19
TRIM13-201ENST00000356017 FAM170AA1A519 330 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 LOC730098B7Z3J9 87 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 GOLGA8SH3BPF8 625 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 DPYSL4O14531 572 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 NRDCO43847 1150 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 IPO7O95373 1038 aaKnown RBP16.26■□□□□ 0.19
TRIM13-201ENST00000356017 TBX18O95935 607 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 MBL2P11226 248 aaPredicted RBP16.26■□□□□ 0.19
TRIM13-201ENST00000356017 KRT3P12035 628 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 TAF5Q15542 800 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 DDX42Q86XP3 938 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRIM13-201ENST00000356017 CELF5Q8N6W0 485 aaKnown RBP16.26■□□□□ 0.19
TRIM13-201ENST00000356017 PIWIL1Q96J94 861 aaKnown RBP16.26■□□□□ 0.19
TRIM13-201ENST00000356017 SLC2A13Q96QE2 648 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 SLC22A12Q96S37 553 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 SELENOOQ9BVL4 669 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 LUC7LQ9NQ29 371 aaKnown RBP16.26■□□□□ 0.19
TRIM13-201ENST00000356017 PARVAQ9NVD7 372 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 OBP2AQ9NY56 170 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 NENFQ9UMX5 172 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 ARHGAP26Q9UNA1 814 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 DENND4AQ7Z401 1863 aa16.26■□□□□ 0.19
TRIM13-201ENST00000356017 ZNF638Q14966 1978 aaKnown RBP16.25■□□□□ 0.19
TRIM13-201ENST00000356017 ANKRD62A6NC57 917 aa16.25■□□□□ 0.19
TRIM13-201ENST00000356017 SIGLEC16A6NMB1 481 aa16.25■□□□□ 0.19
TRIM13-201ENST00000356017 FYNP06241 537 aa16.25■□□□□ 0.19
TRIM13-201ENST00000356017 RRM1P23921 792 aa16.25■□□□□ 0.19
TRIM13-201ENST00000356017 NOS2P35228 1153 aa16.25■□□□□ 0.19
TRIM13-201ENST00000356017 MATKP42679 507 aa16.25■□□□□ 0.19
TRIM13-201ENST00000356017 KPNA1P52294 538 aaPredicted RBP16.25■□□□□ 0.19
TRIM13-201ENST00000356017 RNASE9P60153 205 aaKnown RBP16.25■□□□□ 0.19
TRIM13-201ENST00000356017 COG7P83436 770 aa16.25■□□□□ 0.19
TRIM13-201ENST00000356017 ZP2Q05996 745 aa16.25■□□□□ 0.19
TRIM13-201ENST00000356017 SPA17Q15506 151 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms