RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 CYTH1Q15438 398 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 NBPF20Q3BBV1 942 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 FAM71AQ8IYT1 594 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 FRMD8P1Q9BZ68 369 aaPredicted RBP12.75□□□□□ -0.37
COLCA1-201ENST00000355430 TRIM15Q9C019 465 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 LRRC19Q9H756 370 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 THG1LQ9NWX6 298 aaKnown RBP12.75□□□□□ -0.37
COLCA1-201ENST00000355430 SHOC2Q9UQ13 582 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 PARP4Q9UKK3 1724 aaKnown RBP12.75□□□□□ -0.37
COLCA1-201ENST00000355430 DUOX1Q9NRD9 1551 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 BTBD19C9JJ37 291 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 ATP9AO75110 1047 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 HMBSP08397 361 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 ASTE1Q2TB18 679 aaPredicted RBP12.75□□□□□ -0.37
COLCA1-201ENST00000355430 COG5Q9UP83 839 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 KCPQ6ZWJ8 1503 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 BCL9LQ86UU0 1499 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 FARP2O94887 1054 aaPredicted RBP12.75□□□□□ -0.37
COLCA1-201ENST00000355430 ITGB3P05106 788 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 BMPR2Q13873 1038 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 C10orf120Q5SQS8 335 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 CXCL17Q6UXB2 119 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 CMTM5Q96DZ9 223 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 TMA16Q96EY4 203 aaKnown RBP12.75□□□□□ -0.37
COLCA1-201ENST00000355430 CISHQ9NSE2 258 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 GNGT2O14610 69 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 DGKIO75912 1065 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 ADRA1DP25100 572 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 GJC2Q5T442 439 aaPredicted RBP12.75□□□□□ -0.37
COLCA1-201ENST00000355430 MYLK4Q86YV6 388 aaPredicted RBP12.75□□□□□ -0.37
COLCA1-201ENST00000355430 KCNK16Q96T55 309 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 SLC7A5P2Q9GIP4 190 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 PCDHAC2Q9Y5I4 1007 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 A0A087WZ62 844 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 PGK1P00558 417 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 DNAJB2P25686 324 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 COPAP53621 1224 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 JAM2P57087 298 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 PHEXP78562 749 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 STK32AQ8WU08 396 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 MKL1Q969V6 931 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 VPS39Q96JC1 886 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 FDXACB1Q9BRP7 624 aaPredicted RBP12.75□□□□□ -0.37
COLCA1-201ENST00000355430 BTBD10Q9BSF8 475 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 FTHL17Q9BXU8 183 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 AVPR1AP37288 418 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 MUC3BQ9H195 1237 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 NRCAMQ92823 1304 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 DNM1LO00429 736 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 SHROOM1Q2M3G4 852 aaPredicted RBP12.74□□□□□ -0.37
COLCA1-201ENST00000355430 LRRC8EQ6NSJ5 796 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 KATNAL2Q8IYT4 538 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 ZNF606Q8WXB4 792 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 IGFLR1Q9H665 355 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 SYNDIG1Q9H7V2 258 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 TRPM5Q9NZQ8 1165 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 MCM8Q9UJA3 840 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 VAV3Q9UKW4 847 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 C5P01031 1676 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 M0R2N6 131 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 KRT16P08779 473 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 ELK3P41970 407 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 NCALDP61601 193 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 TBCCQ15814 346 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 RNF43Q68DV7 783 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 PCDHB18PQ96TA0 734 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 MRPL46Q9H2W6 279 aaKnown RBP12.74□□□□□ -0.37
COLCA1-201ENST00000355430 PDP2Q9P2J9 529 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 TPI1P60174 286 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 CREMQ03060 361 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 NFE2Q16621 373 aaPredicted RBP12.74□□□□□ -0.37
COLCA1-201ENST00000355430 HABP4Q5JVS0 413 aaKnown RBP12.74□□□□□ -0.37
COLCA1-201ENST00000355430 DENND5BQ6ZUT9 1274 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 SLC26A11Q86WA9 606 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 MAP4K3Q8IVH8 894 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 GALNT4Q8N4A0 578 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 MTMR14Q8NCE2 650 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 HAUS8Q9BT25 410 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 MRPL40Q9NQ50 206 aaKnown RBP12.74□□□□□ -0.37
COLCA1-201ENST00000355430 TAGLN3Q9UI15 199 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 USP18Q9UMW8 372 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 STARD13Q9Y3M8 1113 aa12.74□□□□□ -0.37
COLCA1-201ENST00000355430 TCRBV7S2A1N4TA0A589 114 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 ARHGAP10A1A4S6 786 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 GSTA4O15217 222 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 UNC5CO95185 931 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 LSM8O95777 96 aaKnown RBP12.73□□□□□ -0.37
COLCA1-201ENST00000355430 LGALS2P05162 132 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 SERPINB3P29508 390 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 GTF2H3Q13889 308 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 GLRA4Q5JXX5 417 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 MTHFD1LQ6UB35 978 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 LCA5Q86VQ0 697 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 RAB42Q8N4Z0 105 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 FIBCD1Q8N539 461 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 MIEF2Q96C03 454 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 HSD17B14Q9BPX1 270 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 TASP1Q9H6P5 420 aa12.73□□□□□ -0.37
COLCA1-201ENST00000355430 SETD1AO15047 1707 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms