RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 ACADSP16219 412 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 VHLP40337 213 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 PHKA2P46019 1235 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 RGS7P49802 495 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 NDST1P52848 882 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 KPNB1Q14974 876 aaKnown RBP12.59□□□□□ -0.39
DDX4-201ENST00000353507 ZRSR2Q15696 482 aaKnown RBP12.59□□□□□ -0.39
DDX4-201ENST00000353507 CELF3Q5SZQ8 465 aaKnown RBP12.59□□□□□ -0.39
DDX4-201ENST00000353507 TRNP1Q6NT89 227 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 RINLQ6ZS11 566 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 CDHR3Q6ZTQ4 885 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 E2F7Q96AV8 911 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 PIWIL1Q96J94 861 aaKnown RBP12.59□□□□□ -0.39
DDX4-201ENST00000353507 MECRQ9BV79 373 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 USP29Q9HBJ7 922 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 ZFATQ9P243 1243 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 ARMCX1Q9P291 453 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 BARX2Q9UMQ3 279 aaPredicted RBP12.59□□□□□ -0.39
DDX4-201ENST00000353507 PTPRFP10586 1907 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 PDHA1P08559 390 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 GCKP35557 465 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 BMPR2Q13873 1038 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 TMEM132DQ14C87 1099 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 BOLA3Q53S33 107 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 CMPK2Q5EBM0 449 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 ALYREFQ86V81 257 aaKnown RBP12.59□□□□□ -0.39
DDX4-201ENST00000353507 PDCD7Q8N8D1 485 aaKnown RBP12.59□□□□□ -0.39
DDX4-201ENST00000353507 PPP1R16BQ96T49 567 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 NMUR2Q9GZQ4 415 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 PLLPQ9Y342 182 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 MAD1L1Q9Y6D9 718 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 MCM3APO60318 1980 aa12.59□□□□□ -0.39
DDX4-201ENST00000353507 CXorf49A8MYA2 514 aaPredicted RBP12.58□□□□□ -0.39
DDX4-201ENST00000353507 TRDMT1O14717 391 aaKnown RBP12.58□□□□□ -0.39
DDX4-201ENST00000353507 APOEP02649 317 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 MCF2P10911 925 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 SDC4P31431 198 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 IGBP1P78318 339 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 BST1Q10588 318 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 CHI3L2Q15782 390 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 GOLGA7BQ2TAP0 167 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 PPP6R3Q5H9R7 873 aaPredicted RBP12.58□□□□□ -0.39
DDX4-201ENST00000353507 GADL1Q6ZQY3 521 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 ARID3BQ8IVW6 561 aaPredicted RBP12.58□□□□□ -0.39
DDX4-201ENST00000353507 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.58□□□□□ -0.39
DDX4-201ENST00000353507 CCDC110Q8TBZ0 833 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 FAM172AQ8WUF8 416 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 APBB2Q92870 758 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 RTP4Q96DX8 246 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 ACAP3Q96P50 834 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 MMADHCQ9H3L0 296 aaPredicted RBP12.58□□□□□ -0.39
DDX4-201ENST00000353507 ASB7Q9H672 318 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 PCDH18Q9HCL0 1135 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 PCMTD2Q9NV79 361 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 KCNK4Q9NYG8 393 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 TAS2R1Q9NYW7 299 aa12.58□□□□□ -0.39
DDX4-201ENST00000353507 PPARGC1AQ9UBK2 798 aaKnown RBP12.58□□□□□ -0.39
DDX4-201ENST00000353507 HBP1O60381 514 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 CSDE1O75534 798 aaKnown RBP12.58□□□□□ -0.4
DDX4-201ENST00000353507 KRT36O76013 467 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 PRKCHP24723 683 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 CPA2P48052 419 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 MRPS35P82673 323 aaKnown RBP12.58□□□□□ -0.4
DDX4-201ENST00000353507 ACSBG2Q5FVE4 666 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.4
DDX4-201ENST00000353507 CAND1Q86VP6 1230 aaKnown RBP12.58□□□□□ -0.4
DDX4-201ENST00000353507 NUDCD3Q8IVD9 361 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 CDKL3Q8IVW4 592 aaPredicted RBP12.58□□□□□ -0.4
DDX4-201ENST00000353507 SMC1BQ8NDV3 1235 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 CFAP61Q8NHU2 1237 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 LRRC39Q96DD0 335 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 MTBPQ96DY7 904 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 C7orf26Q96N11 449 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 NT5C1AQ9BXI3 368 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 WWP1Q9H0M0 922 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 SMARCAD1Q9H4L7 1026 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 VRTNQ9H8Y1 702 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 NMRK1Q9NWW6 199 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 PPP1R1BQ9UD71 204 aaPredicted RBP12.58□□□□□ -0.4
DDX4-201ENST00000353507 CITO14578 2027 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 BCLAF3A2AJT9 711 aaKnown RBP12.58□□□□□ -0.4
DDX4-201ENST00000353507 H3BRJ5 948 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 CAPN9O14815 690 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 ENO1P06733 434 aaKnown RBP12.58□□□□□ -0.4
DDX4-201ENST00000353507 PGK2P07205 417 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 PGM1P36871 562 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 SLC26A2P50443 739 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 RCN2Q14257 317 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 CCDC14Q49A88 953 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 ANO7Q6IWH7 933 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 LCLAT1Q6UWP7 414 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 SRCAPQ6ZRS2 3230 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 ILDR2Q71H61 639 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 CRLF3Q8IUI8 442 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 PQLC3Q8N755 202 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.58□□□□□ -0.4
DDX4-201ENST00000353507 TRPM4Q8TD43 1214 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 TEKT4Q8WW24 435 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 CPB2Q96IY4 423 aa12.58□□□□□ -0.4
DDX4-201ENST00000353507 LBHD1Q9BQE6 289 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms