RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ACAP3Q96P50 834 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 MECRQ9BV79 373 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 C1orf21Q9H246 121 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 WDR6Q9NNW5 1121 aaKnown RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 PSMC3IPQ9P2W1 217 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 EPS15L1Q9UBC2 864 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 PSMD13Q9UNM6 376 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 CPQQ9Y646 472 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 CCDC88AQ3V6T2 1871 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 ANKRD62A6NC57 917 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 ALOX15BO15296 676 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 ZBTB7AO95365 584 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 ZNF182P17025 639 aaPredicted RBP11.03□□□□□ -0.64
CAPN3-203ENST00000349748 TNFAIP3P21580 790 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 BMPR1AP36894 532 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 MARSP56192 900 aaKnown RBP11.03□□□□□ -0.64
CAPN3-203ENST00000349748 OXA1LQ15070 435 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 CCNG2Q16589 344 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 LSM12Q3MHD2 195 aaKnown RBP11.03□□□□□ -0.64
CAPN3-203ENST00000349748 LDLRAP1Q5SW96 308 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 ANKRD26P1Q6NSI1 321 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 TRIM72Q6ZMU5 477 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 DSG4Q86SJ6 1040 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 LILRA2Q8N149 483 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 CAMKK2Q96RR4 588 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 OLFM1Q99784 485 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 WNT8AQ9H1J5 351 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 GINM1Q9NU53 330 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 DSEQ9UL01 958 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 CDH7Q9ULB5 785 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 POTEMA6NI47 508 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 ATP2A1O14983 1001 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 FTLP02792 175 aaPredicted RBP11.03□□□□□ -0.64
CAPN3-203ENST00000349748 EIF2S1P05198 315 aaKnown RBP11.03□□□□□ -0.64
CAPN3-203ENST00000349748 HNRNPFP52597 415 aaKnown RBP11.03□□□□□ -0.64
CAPN3-203ENST00000349748 CAV1Q03135 178 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 NME3Q13232 169 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 DNASE1L3Q13609 305 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 MOGQ16653 247 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 TJAP1Q5JTD0 557 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 PPM1LQ5SGD2 360 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 C11orf63Q6NUN7 778 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 EEPD1Q7L9B9 569 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 PARVGQ9HBI0 331 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 CCDC177Q9NQR7 707 aaPredicted RBP11.03□□□□□ -0.64
CAPN3-203ENST00000349748 KCNK4Q9NYG8 393 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 CRNNQ9UBG3 495 aaPredicted RBP11.03□□□□□ -0.64
CAPN3-203ENST00000349748 SATB2Q9UPW6 733 aa11.03□□□□□ -0.64
CAPN3-203ENST00000349748 ATP8B3O60423 1300 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 LOC100653049A0A140TA62 436 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 WTIPA6NIX2 430 aaPredicted RBP11.02□□□□□ -0.64
CAPN3-203ENST00000349748 M0R2N6 131 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 KPNA4O00629 521 aaPredicted RBP11.02□□□□□ -0.64
CAPN3-203ENST00000349748 KRT34O76011 436 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 RFC1P35251 1148 aaPredicted RBP11.02□□□□□ -0.64
CAPN3-203ENST00000349748 SOX5P35711 763 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 TRAF2Q12933 501 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 DRAP1Q14919 205 aaPredicted RBP11.02□□□□□ -0.64
CAPN3-203ENST00000349748 PPP6R3Q5H9R7 873 aaPredicted RBP11.02□□□□□ -0.64
CAPN3-203ENST00000349748 UBE2UQ5VVX9 321 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 CES4AQ5XG92 561 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 BTBD8Q5XKL5 378 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 BANPQ8N9N5 519 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 SLC20A1Q8WUM9 679 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 SLCO2A1Q92959 643 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 ALPK1Q96QP1 1244 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 HEMGNQ9BXL5 484 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 ZHX3Q9H4I2 956 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 C6orf203Q9P0P8 240 aaPredicted RBP11.02□□□□□ -0.64
CAPN3-203ENST00000349748 STK17AQ9UEE5 414 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 KLQ9UEF7 1012 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 AFG3L2Q9Y4W6 797 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 SQORQ9Y6N5 450 aa11.02□□□□□ -0.64
CAPN3-203ENST00000349748 ARAP2Q8WZ64 1704 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 H3BNH8 94 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 AP3B1O00203 1094 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 CCRL2O00421 344 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 LPXNO60711 386 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 LRRN2O75325 713 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 XRCC5P13010 732 aaKnown RBP11.02□□□□□ -0.65
CAPN3-203ENST00000349748 KRT10P13645 584 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 PTPN1P18031 435 aaKnown RBP11.02□□□□□ -0.65
CAPN3-203ENST00000349748 EPHA3P29320 983 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 TMC5Q6UXY8 1006 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 NSMFQ6X4W1 530 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 TMEM26Q6ZUK4 368 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 CYP2U1Q7Z449 544 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 CHERPQ8IWX8 916 aaKnown RBP11.02□□□□□ -0.65
CAPN3-203ENST00000349748 LSM14AQ8ND56 463 aaKnown RBP11.02□□□□□ -0.65
CAPN3-203ENST00000349748 BRSK1Q8TDC3 778 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 RAD54LQ92698 747 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 CD101Q93033 1021 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 CALN1Q9BXU9 219 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 GCOM2Q9BZD3 368 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-203ENST00000349748 KCTD10Q9H3F6 313 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 VPS45Q9NRW7 570 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 MTMR7Q9Y216 660 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 MYRFQ9Y2G1 1151 aa11.02□□□□□ -0.65
CAPN3-203ENST00000349748 PLOD2O00469 737 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 MTRF1O75570 445 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms