RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SH3PXD2AQ5TCZ1 1133 aa19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 OTUD1Q5VV17 481 aaPredicted RBP19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 Q7L0L9 218 aa19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 CFAP57Q96MR6 1250 aa19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 DDX23Q9BUQ8 820 aaKnown RBP19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 POPDC2Q9HBU9 364 aa19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 CALCOCO1Q9P1Z2 691 aa19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 NUDT5Q9UKK9 219 aa19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 ASB3Q9Y575 518 aa19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 REV3LO60673 3130 aa19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 DPYSL4O14531 572 aa19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 F11P03951 625 aa19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 PDGFRAP16234 1089 aa19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 POU3F3P20264 500 aaPredicted RBP19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 HOXA9P31269 272 aa19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 TAF12Q16514 161 aa19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 RTL10Q7L3V2 364 aa19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 ARCQ7LC44 396 aa19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 ITIH5Q86UX2 942 aa19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 MON1AQ86VX9 555 aa19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 ARFGAP1Q8N6T3 406 aa19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 EFHBQ8N7U6 833 aa19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 ZNF512Q96ME7 567 aaPredicted RBP19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 MTMR10Q9NXD2 777 aa19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 DNMT3BQ9UBC3 853 aaKnown RBP19.88■□□□□ 0.77
CHMP4A-201ENST00000347519 CCDC195A0A1B0GUA6 201 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 ESPNB1AK53 854 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 MYO1FO00160 1098 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 PROSCO94903 275 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 HNRNPA1P09651 372 aaKnown RBP eCLIP19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 IGFBP4P22692 258 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 PSMA2P25787 234 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 MSNP26038 577 aaKnown RBP19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 MATKP42679 507 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 ZNF143P52747 638 aaPredicted RBP19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 NTHL1P78549 312 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 DCAF6Q58WW2 860 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 ZNF569Q5MCW4 686 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 BTBD8Q5XKL5 378 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 NYAP1Q6ZVC0 841 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 SLFN11Q7Z7L1 901 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 SLC35F6Q8N357 371 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 PPP2R3CQ969Q6 453 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 SLITRK1Q96PX8 696 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 CORO1BQ9BR76 489 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 PRKD2Q9BZL6 878 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 ZDHHC7Q9NXF8 308 aa19.87■□□□□ 0.77
CHMP4A-201ENST00000347519 ZNF840PA6NDX5 716 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 FANCGO15287 622 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 PAPLNO95428 1278 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 NCAM1P13591 858 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 RARGP13631 454 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 TCF4P15884 667 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 GJA1P17302 382 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 NOS2P35228 1153 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 CCR2P41597 374 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 ATXN1P54253 815 aaKnown RBP19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 ATP11AP98196 1134 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 ADAM15Q13444 863 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 TMC5Q6UXY8 1006 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 TMEM184AQ6ZMB5 413 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 GAREM2Q75VX8 874 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 ADAM32Q8TC27 787 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 FNIP1Q8TF40 1166 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 CASP10Q92851 521 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 WDR24Q96S15 920 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 TBCBQ99426 244 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 NPY6RQ99463 290 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 APOL5Q9BWW9 433 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 CCSER2Q9H7U1 834 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 TLR8Q9NR97 1041 aaKnown RBP19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 IP6K2Q9UHH9 426 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 USTQ9Y2C2 406 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 ALG6Q9Y672 507 aa19.86■□□□□ 0.77
CHMP4A-201ENST00000347519 MDM4O15151 490 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 MOSPD3O75425 235 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 TBX18O95935 607 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 FTCDO95954 541 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 MYL4P12829 197 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 COMTP21964 271 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 GABRR2P28476 465 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 GNG11P61952 73 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 CDO1Q16878 200 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 SNX30Q5VWJ9 437 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 C11orf63Q6NUN7 778 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 SYCE2Q6PIF2 218 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 BEND5Q7L4P6 421 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 BNIPLQ7Z465 357 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 DAAM2Q86T65 1068 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 ELMOD1Q8N336 334 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 ARHGAP18Q8N392 663 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 DQX1Q8TE96 717 aaKnown RBP19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 OVCA2Q8WZ82 227 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 NT5C3BQ969T7 300 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 TCEAL4Q96EI5 215 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 C16orf45Q96MC5 204 aaPredicted RBP19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 CNPY3Q9BT09 278 aa19.85■□□□□ 0.77
CHMP4A-201ENST00000347519 ABCC13Q9NSE7 274 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms