RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 MAGEA11P43364 429 aa22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 SMARCB1Q12824 385 aa22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 DUPD1Q68J44 220 aa22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 DRICH1Q6PGQ1 229 aaPredicted RBP22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 BBS12Q6ZW61 710 aa22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 BHLHA9Q7RTU4 235 aa22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 BNIPLQ7Z465 357 aa22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 TMEM173Q86WV6 379 aaPredicted RBP22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 RFX6Q8HWS3 928 aa22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 TTC13Q8NBP0 860 aa22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 BCL7CQ8WUZ0 217 aaPredicted RBP22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 ZNF689Q96CS4 500 aaPredicted RBP22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 CALN1Q9BXU9 219 aa22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 FUT8Q9BYC5 575 aa22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 ADAM33Q9BZ11 813 aa22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 FRMD8P1Q9BZ68 369 aaPredicted RBP22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 TRIM66O15016 1216 aa22.39■■□□□ 1.17
TSPAN3-202ENST00000346495 RDXP35241 583 aaKnown RBP22.39■■□□□ 1.17
TSPAN3-202ENST00000346495 DRG2P55039 364 aaKnown RBP22.39■■□□□ 1.17
TSPAN3-202ENST00000346495 WDR5P61964 334 aaKnown RBP22.39■■□□□ 1.17
TSPAN3-202ENST00000346495 LMNB2Q03252 620 aa22.39■■□□□ 1.17
TSPAN3-202ENST00000346495 SCN4BQ8IWT1 228 aa22.39■■□□□ 1.17
TSPAN3-202ENST00000346495 B3GALT6Q96L58 329 aa22.39■■□□□ 1.17
TSPAN3-202ENST00000346495 MAK16Q9BXY0 300 aaKnown RBP22.39■■□□□ 1.17
TSPAN3-202ENST00000346495 NAALADL1Q9UQQ1 740 aa22.39■■□□□ 1.17
TSPAN3-202ENST00000346495 M0QYT0 321 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 DAPK3O43293 454 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 LIASO43766 372 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 TBC1D4O60343 1298 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 CST8O60676 142 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 GAS8O95995 478 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 FYNP06241 537 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 TNNT3P45378 269 aaPredicted RBP22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 DEFB103AP81534 67 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 DPYSL3Q14195 570 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 HLTFQ14527 1009 aaKnown RBP eCLIP22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 PPP1R7Q15435 360 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 TRADDQ15628 312 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 RTP2Q5QGT7 225 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 SYPL2Q5VXT5 272 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 CMTR2Q8IYT2 770 aaKnown RBP22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 FAM71BQ8TC56 605 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 CAVIN3Q969G5 261 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 C8orf48Q96LL4 319 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 CCDC114Q96M63 670 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 DPH5Q9H2P9 285 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 PCDH18Q9HCL0 1135 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 IL23AQ9NPF7 189 aa22.38■■□□□ 1.17
TSPAN3-202ENST00000346495 CARNS1A5YM72 827 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 ZNF487B1APH4 448 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 TNFRSF10BO14763 440 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 EFEMP2O95967 443 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 NCAM1P13591 858 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 CPB1P15086 417 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 GBP1P32455 592 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 SLC5A3P53794 718 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 ATXN1P54253 815 aaKnown RBP22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 DEUP1Q05D60 604 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 GPR17Q13304 367 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 NNTQ13423 1086 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 TFDP2Q14188 446 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 USP41Q3LFD5 358 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 ZC3H12AQ5D1E8 599 aaKnown RBP22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 SPOUT1Q5T280 376 aaKnown RBP22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 OTUD1Q5VV17 481 aaPredicted RBP22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 BEND5Q7L4P6 421 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 DDX42Q86XP3 938 aaKnown RBP eCLIP22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 PSTKQ8IV42 348 aaKnown RBP22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 IGSF21Q96ID5 467 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 GPATCH2LQ9NWQ4 482 aa22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 COL4A4P53420 1690 aaPredicted RBP22.37■■□□□ 1.17
TSPAN3-202ENST00000346495 DYNLT1P63172 113 aa22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 KRT17Q04695 432 aa22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 BYSLQ13895 437 aaKnown RBP22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 DPYSL2Q16555 572 aa22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 KCNT2Q6UVM3 1135 aa22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 TAS1R1Q7RTX1 841 aa22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 SPPL2BQ8TCT7 592 aa22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 C2orf15Q8WU43 125 aaKnown RBP22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 PGAP3Q96FM1 320 aaPredicted RBP22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 ZNF670Q9BS34 389 aa22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 TRIM31Q9BZY9 425 aa22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 RC3H2Q9HBD1 1191 aaKnown RBP22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 CALCOCO1Q9P1Z2 691 aa22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 AP4E1Q9UPM8 1137 aa22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 DRG1Q9Y295 367 aaKnown RBP22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 KIAA0100Q14667 2235 aaKnown RBP22.36■■□□□ 1.17
TSPAN3-202ENST00000346495 MAP2K7O14733 419 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 ACRP10323 421 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 ARPP19P56211 112 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 PITX1P78337 314 aaPredicted RBP22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 MMRN1Q13201 1228 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 CASP8Q14790 479 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 BSPRYQ5W0U4 402 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 SND1Q7KZF4 910 aaKnown RBP eCLIP22.35■■□□□ 1.172e-6■■■■□ 24.8
TSPAN3-202ENST00000346495 UBE2Q1Q7Z7E8 422 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 FAM131BQ86XD5 332 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 RNF168Q8IYW5 571 aaPredicted RBP22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 SCAMP5Q8TAC9 235 aa22.35■■□□□ 1.17
TSPAN3-202ENST00000346495 SLC7A14Q8TBB6 771 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms