RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 C1QTNF3-AMACRE9PGA6 284 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 MEIS2O14770 477 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 IRF6O14896 467 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 HSPA4LO95757 839 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 RARAP10276 462 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 POLR2EP19388 210 aaKnown RBP11.26□□□□□ -0.61
CLCN6-202ENST00000346436 WEE1P30291 646 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 RHOAP61586 193 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 VPS11Q9H270 941 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 A0A0A6YYK5 440 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-202ENST00000346436 AGPSO00116 658 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 GUCA1AP43080 201 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-202ENST00000346436 ITGB3BPQ13352 177 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-202ENST00000346436 USP41Q3LFD5 358 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 GPAT2Q6NUI2 795 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 C3orf62Q6ZUJ4 267 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 PRUNE1Q86TP1 453 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 MSL3Q8N5Y2 521 aaKnown RBP11.26□□□□□ -0.61
CLCN6-202ENST00000346436 SHDQ96IW2 340 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 KCTD10Q9H3F6 313 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 SCOCQ9UIL1 159 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 P4HA2O15460 535 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 MAGEC1O60732 1142 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 NOL4O94818 638 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 ENO1P06733 434 aaKnown RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 ANXA11P50995 505 aaKnown RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 SKOR1P84550 965 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 GLRA4Q5JXX5 417 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 FAXCQ5TGI0 409 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 TIGD7Q6NT04 549 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 MTHFD1LQ6UB35 978 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 RCOR2Q8IZ40 523 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 TTYH3Q9C0H2 523 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 Q9H521 79 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 BCAS3Q9H6U6 928 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 NSMCE4AQ9NXX6 385 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 PKD2L2Q9NZM6 624 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 XPO7Q9UIA9 1087 aaKnown RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 C2orf81A6NN90 581 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 RIPK2O43353 540 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 CST8O60676 142 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 HMOX2P30519 316 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 ALDH18A1P54886 795 aaKnown RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 COPS2P61201 443 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 MRPS6P82932 125 aaKnown RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 TEAD4Q15561 434 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 RBBP7Q16576 425 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 SPRYD7Q5W111 196 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 IRF2BP2Q7Z5L9 587 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 WDCPQ9H6R7 721 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 KCNMB3Q9NPA1 279 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 NMRK2Q9NPI5 230 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 HAO1Q9UJM8 370 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 KCNN4O15554 427 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 SETSIPP0DME0 302 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 CYP2A6P11509 494 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 RARGP13631 454 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 FPGSQ05932 587 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 C1orf146Q5VVC0 180 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 CATSPERGQ6ZRH7 1159 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 SYTL5Q8TDW5 730 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 BHMTQ93088 406 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 NCLNQ969V3 563 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 PWWP2AQ96N64 755 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 MIR1-1HGQ9H1L0 117 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 SPG21Q9NZD8 308 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 TOPAZ1Q8N9V7 1692 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 CASTOR2A6NHX0 329 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 NPY2RP49146 381 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 DAB2P98082 770 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 PPP3CAQ08209 521 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 FASTKD1Q53R41 847 aaKnown RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 LLGL2Q6P1M3 1020 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 FAM71DQ8N9W8 422 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 SPATA18Q8TC71 538 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 AASDHPPTQ9NRN7 309 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 SPATS2LQ9NUQ6 558 aaKnown RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 MED1Q15648 1581 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 MOXD2PA6NHM9 499 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 C5orf58C9J3I9 102 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 SPECC1L-ADORA2AF8WAN1 911 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 PGK1P00558 417 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 APRTP07741 180 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 BEX3Q00994 111 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 POU5F1BQ06416 359 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 EFEMP1Q12805 493 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 CAMK2GQ13555 558 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 PIGHQ14442 188 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 LRRC36Q1X8D7 754 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 GRAMD1BQ3KR37 738 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 RASSF3Q86WH2 238 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 CPA6Q8N4T0 437 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 INPP4AQ96PE3 977 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 C11orf84Q9BUA3 381 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 ROPN1BQ9BZX4 212 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 ROPN1Q9HAT0 212 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 RRN3Q9NYV6 651 aa11.25□□□□□ -0.61
CLCN6-202ENST00000346436 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLCN6-202ENST00000346436 RPN2P04844 631 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 SELPP16109 830 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms