RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 HHIPQ96QV1 700 aa12.55□□□□□ -0.4
TUBD1-203ENST00000346141 PNKPQ96T60 521 aa12.55□□□□□ -0.4
TUBD1-203ENST00000346141 DUSP16Q9BY84 665 aa12.55□□□□□ -0.4
TUBD1-203ENST00000346141 KRTAP3-3Q9BYR6 98 aa12.55□□□□□ -0.4
TUBD1-203ENST00000346141 KRTAP3-2Q9BYR7 98 aa12.55□□□□□ -0.4
TUBD1-203ENST00000346141 PARD6AQ9NPB6 346 aa12.55□□□□□ -0.4
TUBD1-203ENST00000346141 CISHQ9NSE2 258 aa12.55□□□□□ -0.4
TUBD1-203ENST00000346141 ATG2BQ96BY7 2078 aa12.55□□□□□ -0.4
TUBD1-203ENST00000346141 K7EQS6 105 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 AXIN1O15169 862 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 CYP26A1O43174 497 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 CCDC192P0DO97 292 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 HOXC13P31276 330 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 ATP5C1P36542 298 aaKnown RBP12.54□□□□□ -0.4
TUBD1-203ENST00000346141 GAD2Q05329 585 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 GOLGA8FQ08AF8 430 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 GOLGA8DPQ0D2H9 430 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 RSPO4Q2I0M5 234 aaPredicted RBP12.54□□□□□ -0.4
TUBD1-203ENST00000346141 PREPLQ4J6C6 727 aaPredicted RBP12.54□□□□□ -0.4
TUBD1-203ENST00000346141 LY6G5CQ5SRR4 150 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 PPP1R26Q5T8A7 1209 aaPredicted RBP12.54□□□□□ -0.4
TUBD1-203ENST00000346141 KLHDC10Q6PID8 442 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 GPRIN1Q7Z2K8 1008 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 DGLUCYQ7Z3D6 616 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 TADA2BQ86TJ2 420 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 FAM160A2Q8N612 972 aaPredicted RBP12.54□□□□□ -0.4
TUBD1-203ENST00000346141 TSTD1Q8NFU3 115 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 LOXL4Q96JB6 756 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 HEXIM2Q96MH2 286 aaKnown RBP12.54□□□□□ -0.4
TUBD1-203ENST00000346141 ARMCX3Q9UH62 379 aaPredicted RBP12.54□□□□□ -0.4
TUBD1-203ENST00000346141 EBF1Q9UH73 591 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 COQ4Q9Y3A0 265 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 SPTBN2O15020 2390 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 SDK1Q7Z5N4 2213 aa12.54□□□□□ -0.4
TUBD1-203ENST00000346141 A0A0A0MRY4 1105 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 HOXC11O43248 304 aaPredicted RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 KAT7O95251 611 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 APODP05090 189 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 GRIA2P42262 883 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 PGFP49763 221 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 KIF11P52732 1056 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 PMS1P54277 932 aaKnown RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 SEC13P55735 322 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 SLC8A3P57103 927 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 MRPS21P82921 87 aaKnown RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 CSRP2Q16527 193 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 HSF5Q4G112 596 aaPredicted RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 CBWD6Q4V339 395 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 ZNF394Q53GI3 561 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 C2orf27AQ580R0 203 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 CBWD3Q5JTY5 395 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 CBWD5Q5RIA9 395 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 BTBD8Q5XKL5 378 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 HTR3DQ70Z44 454 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 CCDC186Q7Z3E2 898 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 BBS7Q8IWZ6 715 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 SLC4A11Q8NBS3 891 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 ERCC4Q92889 916 aaPredicted RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 TMEM176AQ96HP8 235 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 DHTKD1Q96HY7 919 aaPredicted RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 CDK5RAP1Q96SZ6 601 aaKnown RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 ARID3AQ99856 593 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 KLF16Q9BXK1 252 aaPredicted RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 METTL14Q9HCE5 456 aaKnown RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 ARHGEF4Q9NR80 690 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 SPHK2Q9NRA0 654 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 SEMA4GQ9NTN9 838 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 POLR3BQ9NW08 1133 aaPredicted RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 LSM7Q9UK45 103 aaKnown RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 CDV3Q9UKY7 258 aaKnown RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 MMP17Q9ULZ9 603 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 MYH10P35580 1976 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 SPAG17Q6Q759 2223 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 TRIM49BA6NDI0 452 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 TBX18O95935 607 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 IRF1P10914 325 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 RARGP13631 454 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 SLC6A11P48066 632 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 RAD23BP54727 409 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 YWHAEP62258 255 aaKnown RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 CUL2Q13617 745 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 ARHGAP17Q68EM7 881 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 C12orf40Q86WS4 652 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 ETFBKMTQ8IXQ9 262 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 ZNF276Q8N554 614 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 SLC35C1Q96A29 364 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 ZC3H10Q96K80 434 aaKnown RBP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 CEP63Q96MT8 703 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 UBXN6Q9BZV1 441 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.53□□□□□ -0.4
TUBD1-203ENST00000346141 OSER1Q9NX31 292 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 CLIC5Q9NZA1 410 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 DNMT3LQ9UJW3 386 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 USP3Q9Y6I4 520 aa12.53□□□□□ -0.4
TUBD1-203ENST00000346141 A0A1W2PQH9 124 aa12.52□□□□□ -0.41
TUBD1-203ENST00000346141 GREM1O60565 184 aa12.52□□□□□ -0.41
TUBD1-203ENST00000346141 EPN2O95208 641 aa12.52□□□□□ -0.41
TUBD1-203ENST00000346141 RALAP11233 206 aa12.52□□□□□ -0.41
TUBD1-203ENST00000346141 TNFRSF4P43489 277 aa12.52□□□□□ -0.41
TUBD1-203ENST00000346141 PLA2G4AP47712 749 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms