RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 TRIM68Q6AZZ1 485 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 TMTC1Q8IUR5 882 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 FMNL3Q8IVF7 1028 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 SLC4A11Q8NBS3 891 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 PDZD8Q8NEN9 1154 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 ZMIZ2Q8NF64 920 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 TMEM176AQ96HP8 235 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 FAXDC2Q96IV6 333 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 HNRNPABQ99729 332 aaKnown RBP14.52□□□□□ -0.08
TPM4-202ENST00000344824 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.52□□□□□ -0.08
TPM4-202ENST00000344824 NHEJ1Q9H9Q4 299 aaPredicted RBP14.52□□□□□ -0.08
TPM4-202ENST00000344824 SMPD4Q9NXE4 827 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 GTSE1Q9NYZ3 720 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 GMIPQ9P107 970 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 ZNF840PA6NDX5 716 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 FAM170BA6NMN3 283 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 H0Y858 1186 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 SCAMP3O14828 347 aaKnown RBP14.51□□□□□ -0.09
TPM4-202ENST00000344824 THAP12O43422 761 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 GALR2O43603 387 aaPredicted RBP14.51□□□□□ -0.09
TPM4-202ENST00000344824 FECHP22830 423 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 TARSP26639 723 aaKnown RBP14.51□□□□□ -0.09
TPM4-202ENST00000344824 GNA15P30679 374 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 IFNAR2P48551 515 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 RAD23BP54727 409 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 PTPN5P54829 565 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 PTK2Q05397 1052 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 USP4Q13107 963 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 GOLGA7BQ2TAP0 167 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 RAD9BQ6WBX8 426 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 ZNF852Q6ZMS4 543 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 GPRIN1Q7Z2K8 1008 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 ZNF571Q7Z3V5 609 aaPredicted RBP14.51□□□□□ -0.09
TPM4-202ENST00000344824 NOP9Q86U38 636 aaKnown RBP14.51□□□□□ -0.09
TPM4-202ENST00000344824 CCDC105Q8IYK2 499 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 SH3RF2Q8TEC5 729 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 CCDC42Q96M95 316 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 PRRX2Q99811 253 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 NACA2Q9H009 215 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 SPTLC3Q9NUV7 552 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 FAM86C1Q9NVL1 165 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 PYCARDQ9ULZ3 195 aa14.51□□□□□ -0.09
TPM4-202ENST00000344824 MRPS17Q9Y2R5 130 aaKnown RBP14.51□□□□□ -0.09
TPM4-202ENST00000344824 MTF2Q9Y483 593 aaPredicted RBP14.51□□□□□ -0.09
TPM4-202ENST00000344824 MAN2B1O00754 1011 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 AKR1B10O60218 316 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 CYP11B1P15538 503 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 BRD2P25440 801 aaKnown RBP14.5□□□□□ -0.09
TPM4-202ENST00000344824 WEE1P30291 646 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 PRKCIP41743 596 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 ZNF132P52740 706 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 ZNF268Q14587 947 aaPredicted RBP14.5□□□□□ -0.09
TPM4-202ENST00000344824 SGO2Q562F6 1265 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 RIN3Q8TB24 985 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 EPS8L1Q8TE68 723 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 FAM3CQ92520 227 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 DESI2Q9BSY9 194 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 KCNH6Q9H252 994 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 EBF3Q9H4W6 596 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 GKN1Q9NS71 199 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 CHORDC1Q9UHD1 332 aaPredicted RBP14.5□□□□□ -0.09
TPM4-202ENST00000344824 CNTN6Q9UQ52 1028 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 CPQQ9Y646 472 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 BZW2Q9Y6E2 419 aaKnown RBP14.5□□□□□ -0.09
TPM4-202ENST00000344824 WNT6Q9Y6F9 365 aa14.5□□□□□ -0.09
TPM4-202ENST00000344824 ARNTLO00327 626 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 TNFRSF10BO14763 440 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 ARHGAP6O43182 974 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 MMEP08473 750 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 IRF1P10914 325 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 ARSAP15289 507 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 TNFAIP3P21580 790 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 CYLC1P35663 651 aaPredicted RBP14.49□□□□□ -0.09
TPM4-202ENST00000344824 PPP3CCP48454 512 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 KIF11P52732 1056 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 SLC8A3P57103 927 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 BPIFB4P59827 614 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 CDK17Q00537 523 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 TCF15Q12870 199 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 ZNF77Q15935 545 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 TOGARAM2Q6ZUX3 1019 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 DTWD2Q8NBA8 298 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 ATOH1Q92858 354 aaPredicted RBP14.49□□□□□ -0.09
TPM4-202ENST00000344824 AGPAT1Q99943 283 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 DUSP16Q9BY84 665 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 PDCL3Q9H2J4 239 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 FBXO44Q9H4M3 255 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 CCSER2Q9H7U1 834 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 CSNK1G1Q9HCP0 422 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 DUS2Q9NX74 493 aaKnown RBP14.49□□□□□ -0.09
TPM4-202ENST00000344824 HESX1Q9UBX0 185 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 NOCTQ9UK39 431 aaKnown RBP14.49□□□□□ -0.09
TPM4-202ENST00000344824 TSPAN16Q9UKR8 245 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 SSU72P8A0A1W2PR75 194 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 SOBPA7XYQ1 873 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 SPECC1L-ADORA2AF8WAN1 911 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 LEFTY2O00292 366 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 NCAM2O15394 837 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 OAS1P00973 400 aaKnown RBP14.49□□□□□ -0.09
TPM4-202ENST00000344824 GLULP15104 373 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms