RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CENPOQ9BU64 300 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 NAA15Q9BXJ9 866 aaKnown RBP7.71□□□□□ -1.18
ZNF540-202ENST00000343599 LRRC27Q9C0I9 530 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 EVA1BQ9NVM1 165 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 STOML2Q9UJZ1 356 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 MMP17Q9ULZ9 603 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 DYTNA2CJ06 578 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 PTGESO14684 152 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 C8AP07357 584 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 GOLGA8HP0CJ92 632 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ATP1A3P13637 1013 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 APBA1Q02410 837 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ZNF77Q15935 545 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 LRRN4Q8WUT4 740 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 PYM1Q9BRP8 204 aaKnown RBP7.7□□□□□ -1.18
ZNF540-202ENST00000343599 CUEDC2Q9H467 287 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 OCEL1Q9H607 264 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 INTS13Q9NVM9 706 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 MAGEC2Q9UBF1 373 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-202ENST00000343599 DDX25Q9UHL0 483 aaKnown RBP7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ITGB1BP2Q9UKP3 347 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 SLC12A4Q9UP95 1085 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ATP8B3O60423 1300 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 CFAP69A5D8W1 941 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 SCAMP3O14828 347 aaKnown RBP7.7□□□□□ -1.18
ZNF540-202ENST00000343599 SLC7A4O43246 635 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 RECQL4O94761 1208 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 TMCC1O94876 653 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 PLEKHA8P1O95397 391 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 CTSHP09668 335 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 HAPLN1P10915 354 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ZFXP17010 805 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-202ENST00000343599 GUCY1A3Q02108 690 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 CAPSQ13938 189 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ANKRD20A2Q5SQ80 823 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 SPOUT1Q5T280 376 aaKnown RBP7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ANKRD20A1Q5TYW2 823 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ANKRD20A3Q5VUR7 823 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 SPATA1Q5VX52 437 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ATL3Q6DD88 541 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ANO7Q6IWH7 933 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 VITQ6UXI7 678 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 UNQ6494/PRO21346Q6UXR6 183 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 TRAPPC11Q7Z392 1133 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 HPS6Q86YV9 775 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 PHTF2Q8N3S3 785 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 OSCP1Q8WVF1 389 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 FOXJ1Q92949 421 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 NAF1Q96HR8 494 aaKnown RBP7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ZNF560Q96MR9 790 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ACO2Q99798 780 aaKnown RBP7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ACBD6Q9BR61 282 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 DESI2Q9BSY9 194 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ASAH2Q9NR71 780 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ITIH6Q6UXX5 1313 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 A0A1W2PQD8 194 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 E2F8A0AVK6 867 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 SLITRK3O94933 977 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 NFATC1O95644 943 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 FGFR1P11362 822 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 ODC1P11926 461 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 GLRA2P23416 452 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 YARSP54577 528 aaKnown RBP7.7□□□□□ -1.18
ZNF540-202ENST00000343599 RHDQ02161 417 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 KIF5AQ12840 1032 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 CBX3Q13185 183 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 MAPK6Q16659 721 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 PLK5Q496M5 336 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 GLE1Q53GS7 698 aaKnown RBP7.7□□□□□ -1.18
ZNF540-202ENST00000343599 HIBCHQ6NVY1 386 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-202ENST00000343599 C16orf87Q6PH81 154 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 SLC35F6Q8N357 371 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 NDNQ99608 321 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 PARD6AQ9NPB6 346 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 LZTFL1Q9NQ48 299 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 CUEDC1Q9NWM3 386 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-202ENST00000343599 GCNT4Q9P109 453 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 RAPGEFL1Q9UHV5 662 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 LRRC42Q9Y546 428 aa7.7□□□□□ -1.18
ZNF540-202ENST00000343599 FAM170BA6NMN3 283 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 BACH1O14867 736 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 FAM189A1O60320 539 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 USP17L7P0C7H9 530 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 GARTP22102 1010 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 ATICP31939 592 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 SEC24CP53992 1094 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 HDAC4P56524 1084 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 NNTQ13423 1086 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 EIF4HQ15056 248 aaKnown RBP7.69□□□□□ -1.18
ZNF540-202ENST00000343599 TWF2Q6IBS0 349 aaKnown RBP7.69□□□□□ -1.18
ZNF540-202ENST00000343599 NCCRP1Q6ZVX7 275 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-202ENST00000343599 SPRED2Q7Z698 418 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 RBBP8NLQ8NC74 664 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-202ENST00000343599 NCSTNQ92542 709 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 HAS1Q92839 578 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 ZNF512Q96ME7 567 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-202ENST00000343599 CERS4Q9HA82 394 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 NPDC1Q9NQX5 325 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-202ENST00000343599 TUBD1Q9UJT1 453 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 SPECC1L-ADORA2AF8WAN1 911 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms