RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 SH2D3AQ9BRG2 576 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 SENP6Q9GZR1 1112 aaPredicted RBP10.03□□□□□ -0.8
HOXA1-201ENST00000343060 Q9H521 79 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 FAM96AQ9H5X1 160 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 TBC1D22BQ9NU19 505 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 DNAJC28Q9NX36 388 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 PSMD13Q9UNM6 376 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 WDR81Q562E7 1941 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 SCN4AP35499 1836 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 RIMBP2O15034 1052 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 SIN3BO75182 1162 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 LRCH4O75427 683 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 CAPNS1P04632 268 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 KITP10721 976 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 IL1R2P27930 398 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 JAK3P52333 1124 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 MTTPP55157 894 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 EIF3EP60228 445 aaKnown RBP10.02□□□□□ -0.8
HOXA1-201ENST00000343060 DYNLT1P63172 113 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 MTM1Q13496 603 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 CYLC2Q14093 348 aaPredicted RBP10.02□□□□□ -0.8
HOXA1-201ENST00000343060 MYLK3Q32MK0 819 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 TEDDM1Q5T9Z0 273 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 MBLAC2Q68D91 279 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 LMBRD2Q68DH5 695 aaPredicted RBP10.02□□□□□ -0.8
HOXA1-201ENST00000343060 WDR75Q8IWA0 830 aaKnown RBP10.02□□□□□ -0.8
HOXA1-201ENST00000343060 PQLC1Q8N2U9 271 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 FBXW8Q8N3Y1 598 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 PPM1NQ8N819 430 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 PIWIL2Q8TC59 973 aaKnown RBP10.02□□□□□ -0.8
HOXA1-201ENST00000343060 DNAJC1Q96KC8 554 aaKnown RBP10.02□□□□□ -0.8
HOXA1-201ENST00000343060 SMYD3Q9H7B4 428 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 UBAP1Q9NZ09 502 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 PKD2L1Q9P0L9 805 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 COL20A1Q9P218 1284 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 CCNL1Q9UK58 526 aaPredicted RBP10.02□□□□□ -0.8
HOXA1-201ENST00000343060 BLOC1S6Q9UL45 172 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 INPP5FQ9Y2H2 1132 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 TMX2Q9Y320 296 aa10.02□□□□□ -0.8
HOXA1-201ENST00000343060 HMX2A2RU54 273 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 PPEF1O14829 653 aaPredicted RBP10.02□□□□□ -0.81
HOXA1-201ENST00000343060 MCF2LO15068 1137 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 PFDN1O60925 122 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 KRT38O76015 456 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 PDE5AO76074 875 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 TNFAIP8O95379 198 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 TPP2P29144 1249 aaPredicted RBP10.02□□□□□ -0.81
HOXA1-201ENST00000343060 PMLP29590 882 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 ABCD1P33897 745 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 ALDH1A3P47895 512 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 DCTN2Q13561 401 aaKnown RBP10.02□□□□□ -0.81
HOXA1-201ENST00000343060 NOMO1Q15155 1222 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 TRAPPC3LQ5T215 181 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 DENND5BQ6ZUT9 1274 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 MAVSQ7Z434 540 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 NUP93Q8N1F7 819 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 TMEM35BQ8NCS4 154 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 ZFP28Q8NHY6 868 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 DDI1Q8WTU0 396 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 CHURC1Q8WUH1 139 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 GFM2Q969S9 779 aaKnown RBP10.02□□□□□ -0.81
HOXA1-201ENST00000343060 RTP4Q96DX8 246 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 SMYD2Q9NRG4 433 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 PPP1R1BQ9UD71 204 aaPredicted RBP10.02□□□□□ -0.81
HOXA1-201ENST00000343060 PCDHGC3Q9UN70 934 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 LZTS1Q9Y250 596 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 NUB1Q9Y5A7 615 aa10.02□□□□□ -0.81
HOXA1-201ENST00000343060 ARHGAP10A1A4S6 786 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 CAPN8A6NHC0 703 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 FAM159BA6NKW6 160 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 TXNDC9O14530 226 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 SORBS2O94875 1100 aaKnown RBP10.01□□□□□ -0.81
HOXA1-201ENST00000343060 PROCP04070 461 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 RBP3P10745 1247 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 GABRB2P47870 512 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 EPHB1P54762 984 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 MYBPC1Q00872 1141 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 VPS72Q15906 364 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 ADRM1Q16186 407 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 GRAMD1BQ3KR37 738 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 OLFML2BQ68BL8 750 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 POTEAQ6S8J7 498 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 LDHDQ86WU2 507 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 POU5F2Q8N7G0 328 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 CATSPER1Q8NEC5 780 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 CMASQ8NFW8 434 aaPredicted RBP10.01□□□□□ -0.81
HOXA1-201ENST00000343060 TFB1MQ8WVM0 346 aaKnown RBP10.01□□□□□ -0.81
HOXA1-201ENST00000343060 LRRC39Q96DD0 335 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 CMTM5Q96DZ9 223 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 CGRRF1Q99675 332 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 PDLIM7Q9NR12 457 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 DNAJC16Q9Y2G8 782 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 PCDHAC2Q9Y5I4 1007 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 WDR64B1ANS9 1081 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 FBXO21O94952 628 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 APOEP02649 317 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 CSH1P0DML2 217 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 CSH2P0DML3 217 aa10.01□□□□□ -0.81
HOXA1-201ENST00000343060 FGF3P11487 239 aaPredicted RBP10.01□□□□□ -0.81
HOXA1-201ENST00000343060 TNNI1P19237 187 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms