RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 TRIM17Q9Y577 477 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 TMCC2O75069 709 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 VPS4BO75351 444 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 IL18RAPO95256 599 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 PRKAA1Q13131 559 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 HECTD3Q5T447 861 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 C11orf57Q6ZUT1 292 aaPredicted RBP18.13■□□□□ 0.49
SMAD4-201ENST00000342988 AMER2Q8N7J2 671 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 STOX2Q9P2F5 926 aaPredicted RBP18.13■□□□□ 0.49
SMAD4-201ENST00000342988 ARHGEF33A8MVX0 844 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 MYL9P24844 172 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 CHRDL2Q6WN34 429 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 GLYCTKQ8IVS8 523 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 FAM20AQ96MK3 541 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 CCDC28BQ9BUN5 200 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 SLC25A12O75746 678 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 GATBO75879 557 aaKnown RBP18.13■□□□□ 0.49
SMAD4-201ENST00000342988 SEMA3DO95025 777 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 CES1P23141 567 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 C2orf69Q8N8R5 385 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 LEMD2Q8NC56 503 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 CAPSLQ8WWF8 208 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 SLC38A2Q96QD8 506 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 PAIP1Q9H074 479 aaKnown RBP18.13■□□□□ 0.49
SMAD4-201ENST00000342988 BAIAP2Q9UQB8 552 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 EDC4Q6P2E9 1401 aaKnown RBP18.13■□□□□ 0.49
SMAD4-201ENST00000342988 TRIM64A6NGJ6 449 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 GYS2P54840 703 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 S100A12P80511 92 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 HPS6Q86YV9 775 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 DHX40Q8IX18 779 aaKnown RBP18.13■□□□□ 0.49
SMAD4-201ENST00000342988 GPRASP2Q96D09 838 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 POLR3FQ9H1D9 316 aaPredicted RBP18.13■□□□□ 0.49
SMAD4-201ENST00000342988 CIAO1O76071 339 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 FOSL1P15407 271 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 ARID5BQ14865 1188 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.13■□□□□ 0.49
SMAD4-201ENST00000342988 C1QTNF7Q9BXJ2 289 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 ADPRHL2Q9NX46 363 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 MYRFQ9Y2G1 1151 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 LRPAP1P30533 357 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 ZC3H10Q96K80 434 aaKnown RBP18.12■□□□□ 0.49
SMAD4-201ENST00000342988 NAT9Q9BTE0 207 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 AGO2Q9UKV8 859 aaKnown RBP18.12■□□□□ 0.49
SMAD4-201ENST00000342988 SCP2P22307 547 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 CAPGP40121 348 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 ERFP50548 548 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 GRB14Q14449 540 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 AHCYL2Q96HN2 611 aaKnown RBP18.12■□□□□ 0.49
SMAD4-201ENST00000342988 DDX47Q9H0S4 455 aaKnown RBP18.12■□□□□ 0.49
SMAD4-201ENST00000342988 FAM20CQ8IXL6 584 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 TMCO1Q9UM00 188 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 RUVBL2Q9Y230 463 aaKnown RBP18.12■□□□□ 0.49
SMAD4-201ENST00000342988 NR5A2O00482 541 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 AXIN1O15169 862 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 NFYCQ13952 458 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 TCEA2Q15560 299 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 REXO5Q96IC2 774 aaKnown RBP18.12■□□□□ 0.49
SMAD4-201ENST00000342988 SPATA33Q96N06 139 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 PUS7LQ9H0K6 701 aaKnown RBP18.12■□□□□ 0.49
SMAD4-201ENST00000342988 A0A0D9SFI3 127 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 IPMKQ8NFU5 416 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 NEK7Q8TDX7 302 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 DGCR14Q96DF8 476 aaKnown RBP18.12■□□□□ 0.49
SMAD4-201ENST00000342988 TLR7Q9NYK1 1049 aaKnown RBP18.12■□□□□ 0.49
SMAD4-201ENST00000342988 MLXQ9UH92 298 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 PGK1P00558 417 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 RPL9P32969 192 aaKnown RBP18.12■□□□□ 0.49
SMAD4-201ENST00000342988 ADARP55265 1226 aaKnown RBP18.12■□□□□ 0.49
SMAD4-201ENST00000342988 PYDC2Q56P42 97 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 KBTBD7Q8WVZ9 684 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 ACOT12Q8WYK0 555 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 TMEM120BA0PK00 339 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 GYG1P46976 350 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 DNAJC3Q13217 504 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 MTA1Q13330 715 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 MEA1Q16626 185 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 ZNF248Q8NDW4 579 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 CORO2BQ9UQ03 480 aa18.12■□□□□ 0.49
SMAD4-201ENST00000342988 CYP7B1O75881 506 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 TFE3P19532 575 aaPredicted RBP18.11■□□□□ 0.49
SMAD4-201ENST00000342988 SMAD1Q15797 465 aaKnown RBP18.11■□□□□ 0.49
SMAD4-201ENST00000342988 PKN1Q16512 942 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 INO80DQ53TQ3 878 aaPredicted RBP18.11■□□□□ 0.49
SMAD4-201ENST00000342988 LRRC70Q7Z2Q7 622 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 CCNJLQ8IV13 435 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 SPATA4Q8NEY3 305 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 MED8Q96G25 268 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 MYBPC3Q14896 1274 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 POP5Q969H6 163 aaKnown RBP18.11■□□□□ 0.49
SMAD4-201ENST00000342988 MAST1Q9Y2H9 1570 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 PRXQ9BXM0 1461 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 OR14I1A6ND48 311 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 SHQ1Q6PI26 577 aaKnown RBP18.11■□□□□ 0.49
SMAD4-201ENST00000342988 PPIL6Q8IXY8 311 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 AADATQ8N5Z0 425 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 ELOVL6Q9H5J4 265 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 CLN6Q9NWW5 311 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 CRYL1Q9Y2S2 319 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 THOC2Q8NI27 1593 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms