RNA–Protein interactions for RNA: ENST00000341846.9

TRIM29-201, Transcript of tripartite motif containing 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM29, Length 3,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-201ENST00000341846 VPS37BQ9H9H4 285 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 KCNK9Q9NPC2 374 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 DDX56Q9NY93 547 aaKnown RBP11.56□□□□□ -0.56
TRIM29-201ENST00000341846 CNTN3Q9P232 1028 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 WDR35Q9P2L0 1181 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 NOD1Q9Y239 953 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 TCRBV7S3A2A0A539 114 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 H7C0C1 242 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 CHRNA1P02708 482 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 ASGR1P07306 291 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 SLC10A3P09131 477 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 NEFHP12036 1026 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 ATP5OP48047 213 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 CLCNKBP51801 687 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 SMAD1Q15797 465 aaKnown RBP11.56□□□□□ -0.56
TRIM29-201ENST00000341846 FAM131BQ86XD5 332 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 ALLCQ8N6M5 410 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 CCDC197Q8NCU1 140 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 SLC35F5Q8WV83 523 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 ELAC2Q9BQ52 826 aaKnown RBP11.56□□□□□ -0.56
TRIM29-201ENST00000341846 CNPY3Q9BT09 278 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 DHX35Q9H5Z1 703 aaKnown RBP11.56□□□□□ -0.56
TRIM29-201ENST00000341846 HOMER3Q9NSC5 361 aa11.56□□□□□ -0.56
TRIM29-201ENST00000341846 TRMT13Q9NUP7 481 aaKnown RBP11.56□□□□□ -0.56
TRIM29-201ENST00000341846 F8W810 466 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 LAMB3Q13751 1172 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 LRRC38Q5VT99 294 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 DARS2Q6PI48 645 aaKnown RBP11.55□□□□□ -0.56
TRIM29-201ENST00000341846 RHBDF2Q6PJF5 856 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 OLFML1Q6UWY5 402 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 CYP4X1Q8N118 509 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 PYROXD2Q8N2H3 581 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 ZNF513Q8N8E2 541 aaPredicted RBP11.55□□□□□ -0.56
TRIM29-201ENST00000341846 SOCS4Q8WXH5 440 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 KATNAL1Q9BW62 490 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 XPNPEP3Q9NQH7 507 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 DPPA5A6NC42 116 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 PIRO00625 290 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 DUSP11O75319 330 aaKnown RBP11.55□□□□□ -0.56
TRIM29-201ENST00000341846 TTC4O95801 387 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 CHN1P15882 459 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 DRD4P21917 467 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 YY1P25490 414 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 MAGEA4P43358 317 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 CACNB2Q08289 660 aaPredicted RBP11.55□□□□□ -0.56
TRIM29-201ENST00000341846 ADIGQ0VDE8 80 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 PDIA2Q13087 525 aaKnown RBP11.55□□□□□ -0.56
TRIM29-201ENST00000341846 AUHQ13825 339 aaKnown RBP11.55□□□□□ -0.56
TRIM29-201ENST00000341846 OASLQ15646 514 aaKnown RBP11.55□□□□□ -0.56
TRIM29-201ENST00000341846 KCNA10Q16322 511 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 MDH1BQ5I0G3 518 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 NIPA2Q8N8Q9 360 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 KCNK16Q96T55 309 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 ABCF3Q9NUQ8 709 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 CORO1CQ9ULV4 474 aaPredicted RBP11.55□□□□□ -0.56
TRIM29-201ENST00000341846 MFHAS1Q9Y4C4 1052 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 RPS6KL1Q9Y6S9 549 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 FAM155AB1AL88 458 aaPredicted RBP11.55□□□□□ -0.56
TRIM29-201ENST00000341846 NUDT17P0C025 328 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
TRIM29-201ENST00000341846 EIF3BP55884 814 aaKnown RBP11.55□□□□□ -0.56
TRIM29-201ENST00000341846 MAP3K7CLP57077 242 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 MRPS6P82932 125 aaKnown RBP11.55□□□□□ -0.56
TRIM29-201ENST00000341846 SLC6A3Q01959 620 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 NME3Q13232 169 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 TAF11Q15544 211 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 DCAF6Q58WW2 860 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 MFSD14CQ5VZR4 134 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 PIGZQ86VD9 579 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 C3orf58Q8NDZ4 430 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 KHSRPQ92945 711 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRIM29-201ENST00000341846 SLCO2A1Q92959 643 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 KDM4CQ9H3R0 1056 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 SPC25Q9HBM1 224 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 FAM105AQ9NUU6 356 aa11.55□□□□□ -0.56
TRIM29-201ENST00000341846 AVILO75366 819 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 CD4P01730 458 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 TUBP50607 506 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 ANKRD20A2Q5SQ80 823 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 ANKRD20A1Q5TYW2 823 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 EMC10Q5UCC4 262 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 ANKRD20A3Q5VUR7 823 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 NT5DC4Q86YG4 428 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 SRRM1Q8IYB3 904 aaKnown RBP11.54□□□□□ -0.56
TRIM29-201ENST00000341846 LRRC52Q8N7C0 313 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 P3H4Q92791 437 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 MTG1Q9BT17 334 aaPredicted RBP11.54□□□□□ -0.56
TRIM29-201ENST00000341846 SNRNP25Q9BV90 132 aaKnown RBP11.54□□□□□ -0.56
TRIM29-201ENST00000341846 TSPYL2Q9H2G4 693 aaPredicted RBP11.54□□□□□ -0.56
TRIM29-201ENST00000341846 GTF2IRD1Q9UHL9 959 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 MCF2LO15068 1137 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 GBP1P32455 592 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 RPL22P35268 128 aaKnown RBP11.54□□□□□ -0.56
TRIM29-201ENST00000341846 GABRB2P47870 512 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 HDAC4P56524 1084 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 CDC42EP1Q00587 391 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 BBS9Q3SYG4 887 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 B3GALNT2Q8NCR0 500 aa11.54□□□□□ -0.56
TRIM29-201ENST00000341846 ARHGEF2Q92974 986 aaKnown RBP11.54□□□□□ -0.56
TRIM29-201ENST00000341846 CHMP6Q96FZ7 201 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms