RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 ZNF318Q5VUA4 2279 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 YJEFN3A6XGL0 299 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 E7ENQ6 273 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 STK25O00506 426 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 SCAMP3O14828 347 aaKnown RBP16■□□□□ 0.15
UBE3B-201ENST00000340074 ARSAP15289 507 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 STAT1P42224 750 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 STARD6P59095 220 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 PRKCQQ04759 706 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 PDCLQ13371 301 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 TAF3Q5VWG9 929 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 BTBD8Q5XKL5 378 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 CWF19L1Q69YN2 538 aaKnown RBP16■□□□□ 0.15
UBE3B-201ENST00000340074 KLHDC10Q6PID8 442 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 TPRG1Q6ZUI0 275 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 TADA2BQ86TJ2 420 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 NOP9Q86U38 636 aaKnown RBP16■□□□□ 0.15
UBE3B-201ENST00000340074 DDX42Q86XP3 938 aaKnown RBP eCLIP16■□□□□ 0.15
UBE3B-201ENST00000340074 SCUBE3Q8IX30 993 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 OSCP1Q8WVF1 389 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 DDX1Q92499 740 aaKnown RBP16■□□□□ 0.15
UBE3B-201ENST00000340074 SHDQ96IW2 340 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 SLC4A5Q9BY07 1137 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 TBC1D17Q9HA65 648 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 HPS4Q9NQG7 708 aa16■□□□□ 0.15
UBE3B-201ENST00000340074 A0A1W2PQC6 194 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 OTOL1A6NHN0 477 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-201ENST00000340074 E5RJQ4 531 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 IRF1P10914 325 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 CD72P21854 359 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 ACADSBP45954 432 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 IFNAR2P48551 515 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 KPNA1P52294 538 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-201ENST00000340074 UBASH3AP57075 661 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 EFEMP1Q12805 493 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 RUNX3Q13761 415 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 BSPRYQ5W0U4 402 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 CACNA2D4Q7Z3S7 1137 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 C1orf131Q8NDD1 294 aaKnown RBP15.99■□□□□ 0.15
UBE3B-201ENST00000340074 EPS8L1Q8TE68 723 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 IRGQQ8WZA9 623 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 WBP2Q969T9 261 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 CDK5RAP1Q96SZ6 601 aaKnown RBP15.99■□□□□ 0.15
UBE3B-201ENST00000340074 KLF16Q9BXK1 252 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-201ENST00000340074 PDCL3Q9H2J4 239 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 LINC00597Q9H2U6 94 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 CEP83Q9Y592 693 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 PIAS3Q9Y6X2 628 aa15.99■□□□□ 0.15
UBE3B-201ENST00000340074 ATG2BQ96BY7 2078 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 SHISA7A6NL88 538 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 FBXO21O94952 628 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 MMEP08473 750 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 SOX9P48436 509 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 ZNF445P59923 1031 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 PDGFRLQ15198 375 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 EML3Q32P44 896 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 ITPRIPL2Q3MIP1 535 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 RSRC2Q7L4I2 434 aaKnown RBP15.98■□□□□ 0.15
UBE3B-201ENST00000340074 TMEM110Q86TL2 294 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 MIB1Q86YT6 1006 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 SUGP1Q8IWZ8 645 aaKnown RBP15.98■□□□□ 0.15
UBE3B-201ENST00000340074 RNF214Q8ND24 703 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 SLC20A1Q8WUM9 679 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 EDEM1Q92611 657 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 PPP1R13BQ96KQ4 1090 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 CPXM1Q96SM3 734 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 DDX23Q9BUQ8 820 aaKnown RBP15.98■□□□□ 0.15
UBE3B-201ENST00000340074 FOXQ1Q9C009 403 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 ABCC13Q9NSE7 274 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 IFNKQ9P0W0 207 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 TJP2Q9UDY2 1190 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 RASAL2Q9UJF2 1139 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 NOCTQ9UK39 431 aaKnown RBP15.98■□□□□ 0.15
UBE3B-201ENST00000340074 SH3BP1Q9Y3L3 701 aa15.98■□□□□ 0.15
UBE3B-201ENST00000340074 KANSL1LA0AUZ9 987 aa15.97■□□□□ 0.15
UBE3B-201ENST00000340074 E2F8A0AVK6 867 aa15.97■□□□□ 0.15
UBE3B-201ENST00000340074 PAPSS1O43252 624 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-201ENST00000340074 PI15O43692 258 aa15.97■□□□□ 0.15
UBE3B-201ENST00000340074 LTFP02788 710 aa15.97■□□□□ 0.15
UBE3B-201ENST00000340074 CLCN5P51795 746 aa15.97■□□□□ 0.15
UBE3B-201ENST00000340074 VCPP55072 806 aaKnown RBP15.97■□□□□ 0.15
UBE3B-201ENST00000340074 MLLT6P55198 1093 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-201ENST00000340074 ARID5AQ03989 594 aa15.97■□□□□ 0.15
UBE3B-201ENST00000340074 GOLGA8FQ08AF8 430 aa15.97■□□□□ 0.15
UBE3B-201ENST00000340074 GOLGA8DPQ0D2H9 430 aa15.97■□□□□ 0.15
UBE3B-201ENST00000340074 ASTLQ6HA08 431 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-201ENST00000340074 KIAA1958Q8N8K9 716 aa15.97■□□□□ 0.15
UBE3B-201ENST00000340074 ATP2A3Q93084 1043 aa15.97■□□□□ 0.15
UBE3B-201ENST00000340074 NOX5Q96PH1 765 aa15.97■□□□□ 0.15
UBE3B-201ENST00000340074 MARCH2Q9P0N8 246 aa15.97■□□□□ 0.15
UBE3B-201ENST00000340074 KIAA1549LQ6ZVL6 1849 aa15.96■□□□□ 0.15
UBE3B-201ENST00000340074 FAM170AA1A519 330 aa15.96■□□□□ 0.15
UBE3B-201ENST00000340074 SPECC1L-ADORA2AF8WAN1 911 aa15.96■□□□□ 0.15
UBE3B-201ENST00000340074 GLULP15104 373 aa15.96■□□□□ 0.15
UBE3B-201ENST00000340074 CTHP32929 405 aa15.96■□□□□ 0.15
UBE3B-201ENST00000340074 CDH5P33151 784 aaPredicted RBP15.96■□□□□ 0.15
UBE3B-201ENST00000340074 UBXN2BQ14CS0 331 aa15.96■□□□□ 0.15
UBE3B-201ENST00000340074 ZNF852Q6ZMS4 543 aa15.96■□□□□ 0.15
UBE3B-201ENST00000340074 ZNF677Q86XU0 584 aa15.96■□□□□ 0.15
UBE3B-201ENST00000340074 CPA6Q8N4T0 437 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms