RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 OR7A10O76100 309 aa13.21□□□□□ -0.3
USP47-202ENST00000339865 PLEKHA8P1O95397 391 aa13.21□□□□□ -0.3
USP47-202ENST00000339865 EFHC1Q5JVL4 640 aa13.21□□□□□ -0.3
USP47-202ENST00000339865 SMYD1Q8NB12 490 aa13.21□□□□□ -0.3
USP47-202ENST00000339865 CCDC126Q96EE4 140 aa13.21□□□□□ -0.3
USP47-202ENST00000339865 MAGEB18Q96M61 343 aa13.21□□□□□ -0.3
USP47-202ENST00000339865 MKNK1Q9BUB5 465 aa13.21□□□□□ -0.3
USP47-202ENST00000339865 GREM2Q9H772 168 aa13.21□□□□□ -0.3
USP47-202ENST00000339865 PI4KBQ9UBF8 816 aa13.21□□□□□ -0.3
USP47-202ENST00000339865 PARD3Q8TEW0 1356 aa13.21□□□□□ -0.3
USP47-202ENST00000339865 GJA8P48165 433 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 THOC7Q6I9Y2 204 aaKnown RBP13.2□□□□□ -0.3
USP47-202ENST00000339865 RIPOR1Q6ZS17 1223 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 CCDC36Q8IYA8 594 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 TBATAQ96M53 351 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 PPP1R10Q96QC0 940 aaKnown RBP13.2□□□□□ -0.3
USP47-202ENST00000339865 BAIAP2Q9UQB8 552 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 ADCY6O43306 1168 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 CBFA2T3O75081 653 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 SASH1O94885 1247 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 OR6A2O95222 327 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 TCF4P15884 667 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 ERCC2P18074 760 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 TRMT5Q32P41 509 aaKnown RBP13.2□□□□□ -0.3
USP47-202ENST00000339865 PDPK2PQ6A1A2 396 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 ZNF605Q86T29 641 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 DNAJC10Q8IXB1 793 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 hCG_1984214I3L0E3 225 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 ASNSP08243 561 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 IFNAR1P17181 557 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 SP100P23497 879 aaPredicted RBP13.2□□□□□ -0.3
USP47-202ENST00000339865 ACADLP28330 430 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 OR6Y1Q8NGX8 325 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 TFB1MQ8WVM0 346 aaKnown RBP13.2□□□□□ -0.3
USP47-202ENST00000339865 RAD54LQ92698 747 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 MED15Q96RN5 788 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 PTPRHQ9HD43 1115 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 ANAPC2Q9UJX6 822 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 NUDT5Q9UKK9 219 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 MGAT4AQ9UM21 535 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 PBLDP30039 288 aaPredicted RBP13.2□□□□□ -0.3
USP47-202ENST00000339865 GRK3P35626 688 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 CRKP46108 304 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 AQP5P55064 265 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 MTTPP55157 894 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 ATP13A5Q4VNC0 1218 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 MZT2AQ6P582 158 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 ZDHHC13Q8IUH4 622 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 BLOC1S5Q8TDH9 187 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 FAM120BQ96EK7 910 aaKnown RBP13.2□□□□□ -0.3
USP47-202ENST00000339865 NFKBIZQ9BYH8 718 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 LIMD1Q9UGP4 676 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 PRELID1Q9Y255 219 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 PDE8BO95263 885 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 PTGER2P43116 358 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 LSM3P62310 102 aaKnown RBP13.2□□□□□ -0.3
USP47-202ENST00000339865 ULK2Q8IYT8 1036 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 SLC7A14Q8TBB6 771 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 AP1S3Q96PC3 154 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 FNIP1Q8TF40 1166 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 SEMA4DQ92854 862 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 C7orf25Q9BPX7 421 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 CATSPERBQ9H7T0 1116 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 RXFP1Q9HBX9 757 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 FAM50BQ9Y247 325 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 LRCH1Q9Y2L9 728 aa13.2□□□□□ -0.3
USP47-202ENST00000339865 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
USP47-202ENST00000339865 CHRNGP07510 517 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 FGRP09769 529 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 ERVK-10P10266 1014 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 PRG2P13727 222 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 NCK1P16333 377 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 HSD17B3P37058 310 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 NUMBP49757 651 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 SLC18A3Q16572 532 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 UNC5CLQ8IV45 518 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 PIGKQ92643 395 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 DYNLL2Q96FJ2 89 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 FBXO28Q9NVF7 368 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 HAT1O14929 419 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 HOXB7P09629 217 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 CLUP10909 449 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 NPR3P17342 541 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 TTC39CQ8N584 583 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 FAR2Q96K12 515 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 RNF145Q96MT1 663 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 ERP44Q9BS26 406 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 POLR3FQ9H1D9 316 aaPredicted RBP13.19□□□□□ -0.3
USP47-202ENST00000339865 PRR12Q9ULL5 1215 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 RPS6KL1Q9Y6S9 549 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 CCNCP24863 283 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 ZNF846Q147U1 533 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 C1orf189Q5VU69 101 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 SWSAP1Q6NVH7 229 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 RNF44Q7L0R7 432 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 MYCBPAPQ8TBZ2 947 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 COX4I2Q96KJ9 171 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 C2orf40Q9H1Z8 148 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 DBNDD1Q9H9R9 158 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 LSM7Q9UK45 103 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms