RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 CCNT2O60583 730 aaKnown RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 RSL1D1O76021 490 aaKnown RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ARIH2O95376 493 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ICAM1P05362 532 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 RRM1P23921 792 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ADRA1DP25100 572 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 RCVRNP35243 200 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 FDFT1P37268 417 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 PIK3CAP42336 1068 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ZNF157P51786 506 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ARL4CP56559 192 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 CACNB2Q08289 660 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 SREBF2Q12772 1141 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 CLUL1Q15846 466 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ISLR2Q6UXK2 745 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 KBTBD6Q86V97 674 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 GLYCTKQ8IVS8 523 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 GDPD5Q8WTR4 605 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 PRPF31Q8WWY3 499 aaKnown RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 SGF29Q96ES7 293 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 OXNAD1Q96HP4 312 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 TRAIPQ9BWF2 469 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ZFYVE28Q9HCC9 887 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ALG13Q9NP73 1137 aaKnown RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 DNMT3BQ9UBC3 853 aaKnown RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 GPC6Q9Y625 555 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 FAM47E-STBD1D6RA91 191 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 K7EPI3 171 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 FCHO1O14526 889 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 FSCN2O14926 492 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 MTA2O94776 668 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 PABPC1P11940 636 aaKnown RBP5.81□□□□□ -1.48
CSDE1-202ENST00000339438 KRT13P13646 458 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 GNA11P29992 359 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 CPA2P48052 419 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 NEK2P51955 445 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 KRT17Q04695 432 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 PRKCZQ05513 592 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 NSUN2Q08J23 767 aaKnown RBP eCLIP5.81□□□□□ -1.48
CSDE1-202ENST00000339438 GALNT2Q10471 571 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 COASYQ13057 564 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 STAT4Q14765 748 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 PHKG1Q16816 387 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 LRRC36Q1X8D7 754 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 MAP7D1Q3KQU3 841 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 C6orf183Q5T699 404 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 DYMQ7RTS9 669 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 CYTH2Q99418 400 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 OSBPL6Q9BZF3 934 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 DCLK3Q9C098 648 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 TRABDQ9H4I3 376 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 ZNF408Q9H9D4 720 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.81□□□□□ -1.48
CSDE1-202ENST00000339438 ZNF287Q9HBT7 754 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 SMG5Q9UPR3 1016 aaKnown RBP5.81□□□□□ -1.48
CSDE1-202ENST00000339438 PCDHB2Q9Y5E7 798 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 SNX9Q9Y5X1 595 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 ZNF638Q14966 1978 aaKnown RBP5.81□□□□□ -1.48
CSDE1-202ENST00000339438 A0A0B4J269 797 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 LOC105371267A0A1B0GV96 52 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 TRIM64CA6NLI5 447 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 CYP3A4P08684 503 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 OR52Z1P0C646 297 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 GRM5P41594 1212 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 TECP42680 631 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 IFITM2Q01629 132 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 TUBB3Q13509 450 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 MMEL1Q495T6 779 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 TTBK2Q6IQ55 1244 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 C16orf87Q6PH81 154 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 LVRNQ6Q4G3 990 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 C4orf33Q8N1A6 199 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 GRIN3AQ8TCU5 1115 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 TRPC4APQ8TEL6 797 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 LARP4BQ92615 738 aaKnown RBP5.81□□□□□ -1.48
CSDE1-202ENST00000339438 RAD54LQ92698 747 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 MCUR1Q96AQ8 359 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 ZNF512Q96ME7 567 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-202ENST00000339438 GDF15Q99988 308 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 SENP7Q9BQF6 1050 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 OSBPL10Q9BXB5 764 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 CHST7Q9NS84 486 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 CFAP54Q96N23 3096 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 SF3B1O75533 1304 aaKnown RBP eCLIP5.81□□□□□ -1.481e-6■■■■■ 28.6
CSDE1-202ENST00000339438 MYADML2A6NDP7 307 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 CAPN8A6NHC0 703 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 SLC15A5A6NIM6 579 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 B2RBV5 119 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 F5H6K3 240 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 H3BRJ5 948 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 EML1O00423 815 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 FBXO21O94952 628 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 CRTAMO95727 393 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 KLRC2P26717 231 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 PMLP29590 882 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 PRDX6P30041 224 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 CETN2P41208 172 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 NCKAP1LP55160 1127 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 ARHGAP4P98171 946 aa5.81□□□□□ -1.48
CSDE1-202ENST00000339438 CDKL1Q00532 357 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms