RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TPGS1Q6ZTW0 290 aa14.1□□□□□ -0.15
NUDCD3-201ENST00000338427 TSTD1Q8NFU3 115 aa14.1□□□□□ -0.15
NUDCD3-201ENST00000338427 TCEAL3Q969E4 200 aa14.1□□□□□ -0.15
NUDCD3-201ENST00000338427 EXOC4Q96A65 974 aa14.1□□□□□ -0.15
NUDCD3-201ENST00000338427 DUSP16Q9BY84 665 aa14.1□□□□□ -0.15
NUDCD3-201ENST00000338427 FBXO44Q9H4M3 255 aa14.1□□□□□ -0.15
NUDCD3-201ENST00000338427 TLR8Q9NR97 1041 aaKnown RBP14.1□□□□□ -0.15
NUDCD3-201ENST00000338427 SPHK2Q9NRA0 654 aa14.1□□□□□ -0.15
NUDCD3-201ENST00000338427 CISHQ9NSE2 258 aa14.1□□□□□ -0.15
NUDCD3-201ENST00000338427 TBC1D14Q9P2M4 693 aa14.1□□□□□ -0.15
NUDCD3-201ENST00000338427 MMP17Q9ULZ9 603 aa14.1□□□□□ -0.15
NUDCD3-201ENST00000338427 TBC1D3BA6NDS4 549 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 GOLGA6L4A6NEF3 574 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 EPN2O95208 641 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 ADH1CP00326 375 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 KLKB1P03952 638 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 HMBSP08397 361 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 EPB41P11171 864 aaKnown RBP14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 GBP1P32455 592 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 GTF2H1P32780 548 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 GRIA2P42262 883 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 MXI1P50539 228 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 MRPS21P82921 87 aaKnown RBP14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 DCAF17Q5H9S7 520 aaPredicted RBP14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 HTR3DQ70Z44 454 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 DDX42Q86XP3 938 aaKnown RBP eCLIP14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 MIB1Q86YT6 1006 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 ETFBKMTQ8IXQ9 262 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 FBXL13Q8NEE6 735 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 BHMTQ93088 406 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 ACDQ96AP0 544 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 TMEM176AQ96HP8 235 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 ZC3H10Q96K80 434 aaKnown RBP14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 ACOX2Q99424 681 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 IMPG2Q9BZV3 1241 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 PLK2Q9NYY3 685 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 EBF1Q9UH73 591 aa14.09□□□□□ -0.15
NUDCD3-201ENST00000338427 SLC30A4O14863 429 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 LRP3O75074 770 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 ZNF806P0C7X5 589 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 TNFRSF4P43489 277 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 TUBP50607 506 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 CREB5Q02930 508 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 PLA2G2CQ5R387 149 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 C10orf120Q5SQS8 335 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 TOGARAM2Q6ZUX3 1019 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 DEFB119Q8N690 84 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 CCDC150Q8NCX0 1101 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 MDGA1Q8NFP4 955 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 SPATA20Q8TB22 786 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 UBA3Q8TBC4 463 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 SMARCE1Q969G3 411 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 RTKNQ9BST9 563 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 CYLDQ9NQC7 956 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 NAGPAQ9UK23 515 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 MAN1B1Q9UKM7 699 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 CIZ1Q9ULV3 898 aaPredicted RBP14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 USP3Q9Y6I4 520 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 SPAG17Q6Q759 2223 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 CACNA1AO00555 2505 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 KIAA1549LQ6ZVL6 1849 aa14.08□□□□□ -0.16
NUDCD3-201ENST00000338427 WASH3PC4AMC7 463 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 PRRT4C9JH25 899 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 NEDD8-MDP1E9PL57 170 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 RNF225M0QZC1 329 aaPredicted RBP14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 CISD3P0C7P0 127 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 BMP6P22004 513 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 KCNA4P22459 653 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 PLA2G4AP47712 749 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 FKBP3Q00688 224 aaKnown RBP14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 ENPEPQ07075 957 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 EFEMP1Q12805 493 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 AASDHQ4L235 1098 aaPredicted RBP14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 BTBD8Q5XKL5 378 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 PIGZQ86VD9 579 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 RASSF3Q86WH2 238 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 ZC3H3Q8IXZ2 948 aaKnown RBP14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 KIAA1958Q8N8K9 716 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 NETO1Q8TDF5 533 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 LOXL4Q96JB6 756 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 GSDMAQ96QA5 445 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 DUSP9Q99956 384 aaKnown RBP14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 RMND1Q9NWS8 449 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 DEC1Q9P2X7 70 aa14.07□□□□□ -0.16
NUDCD3-201ENST00000338427 THADAQ6YHU6 1953 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 PATE3B3GLJ2 98 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 PPP1R3GB7ZBB8 358 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 BIN1O00499 593 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 HOXC11O43248 304 aaPredicted RBP14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 STC2O76061 302 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 TYRP14679 529 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 SDHBP21912 280 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 MPLP40238 635 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 EIF2DP41214 584 aaKnown RBP14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 NUCB2P80303 420 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 PDE4CQ08493 712 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 BECN1Q14457 450 aa14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 USP39Q53GS9 565 aaKnown RBP14.06□□□□□ -0.16
NUDCD3-201ENST00000338427 C10orf76Q5T2E6 689 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms