RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SPOCD1Q6ZMY3 1216 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 C2orf15Q8WU43 125 aaKnown RBP15.34■□□□□ 0.05
CBX3-201ENST00000337620 AUTS2Q8WXX7 1259 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 HERPUD2Q9BSE4 406 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 MTIF3Q9H2K0 278 aaKnown RBP15.34■□□□□ 0.05
CBX3-201ENST00000337620 CALCOCO1Q9P1Z2 691 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 M0QYT0 321 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 HAPLN1P10915 354 aaPredicted RBP15.34■□□□□ 0.05
CBX3-201ENST00000337620 KRT10P13645 584 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 CA8P35219 290 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 NME3Q13232 169 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 BOLA3Q53S33 107 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 STRADAQ7RTN6 431 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 ZDHHC14Q8IZN3 488 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 SCML4Q8N228 414 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 SLC7A14Q8TBB6 771 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 ADAM32Q8TC27 787 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 PHOSPHO2Q8TCD6 241 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 NPY6RQ99463 290 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 HINFPQ9BQA5 517 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 PLEKHA4Q9H4M7 779 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.34■□□□□ 0.05
CBX3-201ENST00000337620 LCHNA4D1U4 455 aa15.33■□□□□ 0.04
CBX3-201ENST00000337620 KDELR1P24390 212 aa15.33■□□□□ 0.04
CBX3-201ENST00000337620 COPS2P61201 443 aa15.33■□□□□ 0.04
CBX3-201ENST00000337620 YWHAGP61981 247 aaKnown RBP eCLIP15.33■□□□□ 0.04
CBX3-201ENST00000337620 SLC7A5Q01650 507 aa15.33■□□□□ 0.04
CBX3-201ENST00000337620 TFDP3Q5H9I0 405 aa15.33■□□□□ 0.04
CBX3-201ENST00000337620 CYP4V2Q6ZWL3 525 aaPredicted RBP15.33■□□□□ 0.04
CBX3-201ENST00000337620 CMASQ8NFW8 434 aaPredicted RBP15.33■□□□□ 0.04
CBX3-201ENST00000337620 NT5C3BQ969T7 300 aa15.33■□□□□ 0.04
CBX3-201ENST00000337620 PARD6BQ9BYG5 372 aa15.33■□□□□ 0.04
CBX3-201ENST00000337620 MRPL17Q9NRX2 175 aaKnown RBP15.33■□□□□ 0.04
CBX3-201ENST00000337620 GPATCH2LQ9NWQ4 482 aa15.33■□□□□ 0.04
CBX3-201ENST00000337620 KIAA1671Q9BY89 1806 aa15.33■□□□□ 0.04
CBX3-201ENST00000337620 CD48P09326 243 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 LINC00271P0C7V0 271 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 CDH6P55285 790 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 DEUP1Q05D60 604 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 BTBD8Q5XKL5 378 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 DENND5BQ6ZUT9 1274 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 FAM131BQ86XD5 332 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 PRELID2Q8N945 189 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 KLHL23Q8NBE8 558 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 HDAC7Q8WUI4 952 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 MAIP1Q8WWC4 291 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 CLP1Q92989 425 aaKnown RBP15.32■□□□□ 0.04
CBX3-201ENST00000337620 CALN1Q9BXU9 219 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 FBXO44Q9H4M3 255 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 PATJQ8NI35 1801 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 CCDC85CA6NKD9 419 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 C3orf70A6NLC5 250 aaPredicted RBP15.32■□□□□ 0.04
CBX3-201ENST00000337620 CDKN2BP42772 138 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 USP46P62068 366 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 RPL10AP62906 217 aaKnown RBP15.32■□□□□ 0.04
CBX3-201ENST00000337620 SIX1Q15475 284 aaPredicted RBP15.32■□□□□ 0.04
CBX3-201ENST00000337620 ZC3H12AQ5D1E8 599 aaKnown RBP15.32■□□□□ 0.04
CBX3-201ENST00000337620 ERMARDQ5T6L9 678 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 OTUD1Q5VV17 481 aaPredicted RBP15.32■□□□□ 0.04
CBX3-201ENST00000337620 ZNF461Q8TAF7 563 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 GIPC2Q8TF65 315 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 MAGOHBQ96A72 148 aaKnown RBP15.32■□□□□ 0.04
CBX3-201ENST00000337620 PNKPQ96T60 521 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 SNRNP25Q9BV90 132 aaKnown RBP15.32■□□□□ 0.04
CBX3-201ENST00000337620 AFF4Q9UHB7 1163 aaKnown RBP15.32■□□□□ 0.04
CBX3-201ENST00000337620 AMACRQ9UHK6 382 aa15.32■□□□□ 0.04
CBX3-201ENST00000337620 hCG_1818297A0A087WSY0 165 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 TJP3O95049 919 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 RDXP35241 583 aaKnown RBP15.31■□□□□ 0.04
CBX3-201ENST00000337620 PGFP49763 221 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 ADCY2Q08462 1091 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 KRT81Q14533 505 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 GLE1Q53GS7 698 aaKnown RBP15.31■□□□□ 0.04
CBX3-201ENST00000337620 CCDC185Q8N715 623 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 TEKT4Q8WW24 435 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 C1orf54Q8WWF1 131 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 ABHD8Q96I13 439 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 TRIM62Q9BVG3 475 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 FAM204AQ9H8W3 233 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 ABCC13Q9NSE7 274 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 DMGDHQ9UI17 866 aaKnown RBP15.31■□□□□ 0.04
CBX3-201ENST00000337620 SCML2Q9UQR0 700 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 A0A1W2PQH9 124 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 RAD51CO43502 376 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 PHF2O75151 1096 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 ZMYND10O75800 440 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 ENDOD1O94919 500 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 YWHAQP27348 245 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 TUFMP49411 452 aaKnown RBP15.31■□□□□ 0.04
CBX3-201ENST00000337620 KLF1Q13351 362 aaPredicted RBP15.31■□□□□ 0.04
CBX3-201ENST00000337620 MTMR3Q13615 1198 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 PPP2R5EQ16537 467 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 CA9Q16790 459 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 SCD5Q86SK9 330 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 MAP7D3Q8IWC1 876 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 CCDC26Q8TAB7 109 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 SP7Q8TDD2 431 aaPredicted RBP15.31■□□□□ 0.04
CBX3-201ENST00000337620 SPATA17Q96L03 361 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 NMUR1Q9HB89 426 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 CYP4F11Q9HBI6 524 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms