RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 FDXACB1Q9BRP7 624 aaPredicted RBP14.18□□□□□ -0.14
RTN4-202ENST00000337526 ZCWPW1Q9H0M4 648 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 SCN3BQ9NY72 215 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 ABI2Q9NYB9 513 aaPredicted RBP14.18□□□□□ -0.14
RTN4-202ENST00000337526 LSM7Q9UK45 103 aaKnown RBP14.18□□□□□ -0.14
RTN4-202ENST00000337526 CLPTM1O96005 669 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 SLC2A3P11169 496 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 SLC26A2P50443 739 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 N4BP2L1Q5TBK1 243 aaPredicted RBP14.17□□□□□ -0.14
RTN4-202ENST00000337526 PDPK2PQ6A1A2 396 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 OTUB1Q96FW1 271 aaPredicted RBP14.17□□□□□ -0.14
RTN4-202ENST00000337526 TBCBQ99426 244 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 KLHL4Q9C0H6 718 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 ZNF556Q9HAH1 456 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 TRPC7Q9HCX4 862 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 TSPAN16Q9UKR8 245 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 VPS9D1Q9Y2B5 631 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 PRG3Q9Y2Y8 225 aaPredicted RBP14.17□□□□□ -0.14
RTN4-202ENST00000337526 GJB6O95452 261 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 PLIN5Q00G26 463 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 METTL7BQ6UX53 244 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 YTHDF3Q7Z739 585 aaKnown RBP14.17□□□□□ -0.14
RTN4-202ENST00000337526 TCF7L2Q9NQB0 619 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 MST1RQ04912 1400 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 ARHGAP23Q9P227 1491 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 C5orf58C9J3I9 102 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 RNF225M0QZC1 329 aaPredicted RBP14.17□□□□□ -0.14
RTN4-202ENST00000337526 SLC34A1Q06495 639 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 RRP1BQ14684 758 aaKnown RBP14.17□□□□□ -0.14
RTN4-202ENST00000337526 FUT11Q495W5 492 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 MAP4K3Q8IVH8 894 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 KIAA2013Q8IYS2 634 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 ZCCHC9Q8N567 271 aaKnown RBP14.17□□□□□ -0.14
RTN4-202ENST00000337526 APOPT1Q96IL0 206 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 FOPNLQ96NB1 174 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 KCNMB3Q9NPA1 279 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 UBP1Q9NZI7 540 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 ARMCX1Q9P291 453 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 CTNNAL1Q9UBT7 734 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 PAIP2BQ9ULR5 123 aaKnown RBP14.17□□□□□ -0.14
RTN4-202ENST00000337526 LRCH1Q9Y2L9 728 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 F8VP50 259 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 CYB561D2O14569 222 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 SHBGP04278 402 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 ERMARDQ5T6L9 678 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 VPS37AQ8NEZ2 397 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 CENPTQ96BT3 561 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 PARK7Q99497 189 aaKnown RBP14.17□□□□□ -0.14
RTN4-202ENST00000337526 BRD8Q9H0E9 1235 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 GANQ9H2C0 597 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 THAP1Q9NVV9 213 aa14.17□□□□□ -0.14
RTN4-202ENST00000337526 BARX2Q9UMQ3 279 aaPredicted RBP14.17□□□□□ -0.14
RTN4-202ENST00000337526 ZSCAN5DPP0CG00 497 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 ZNF23P17027 643 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 GP5P40197 560 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 HARS2P49590 506 aaKnown RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 TBL3Q12788 808 aaKnown RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 AUHQ13825 339 aaKnown RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 TNS2Q63HR2 1409 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 MIB1Q86YT6 1006 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 GTF3C2Q8WUA4 911 aaPredicted RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 OXNAD1Q96HP4 312 aaPredicted RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 CPB2Q96IY4 423 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 ZNF333Q96JL9 665 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 L3MBTL3Q96JM7 780 aaPredicted RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 MYLK2Q9H1R3 596 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 EXOSC4Q9NPD3 245 aaKnown RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 PAPOLBQ9NRJ5 636 aaKnown RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 TRMT6Q9UJA5 497 aaKnown RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 REXO2Q9Y3B8 237 aaKnown RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 PEX5P50542 639 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 CACNA2D1P54289 1103 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 CDH8P55286 799 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 DLG4P78352 724 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 FAAP100Q0VG06 881 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 NIPA1Q7RTP0 329 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 KYQ8NBH2 561 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 OTULINQ96BN8 352 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 FAM136AQ96C01 138 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 ZBTB45Q96K62 511 aaPredicted RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 VANGL2Q9ULK5 521 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 ANKRD63C9JTQ0 380 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 SERPINE1P05121 402 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 NDST1P52848 882 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 ADRM1Q16186 407 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 APOBEC3HQ6NTF7 200 aaKnown RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 ZPBP2Q6X784 338 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 FBXO16Q8IX29 292 aaPredicted RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 PRELID2Q8N945 189 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 TDRD5Q8NAT2 981 aaKnown RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 CKAP2Q8WWK9 683 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 INPP4AQ96PE3 977 aaPredicted RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 NR1H4Q96RI1 486 aaPredicted RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 CEP41Q9BYV8 373 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 SPON1Q9HCB6 807 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 GPAMQ9HCL2 828 aa14.16□□□□□ -0.14
RTN4-202ENST00000337526 GEMIN8Q9NWZ8 242 aaKnown RBP14.16□□□□□ -0.14
RTN4-202ENST00000337526 CCL15-CCL14A0A0B4J2E2 113 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 CFAP99D6REC4 459 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 RBP1P09455 135 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms