RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 PRR11Q96HE9 360 aaPredicted RBP17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 DCLRE1BQ9H816 532 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 B2RBV5 119 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 H3BRJ5 948 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 CAPN9O14815 690 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 PTPN11Q06124 597 aaPredicted RBP17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 ZRSR2Q15696 482 aaKnown RBP17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 IER5Q5VY09 327 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 OR52E8Q6IFG1 317 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 DCAKDQ8WVC6 231 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 RXFP2Q8WXD0 754 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 BTBD10Q9BSF8 475 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 CADM1Q9BY67 442 aaKnown RBP17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 ASCC2Q9H1I8 757 aaPredicted RBP17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 HMGXB4Q9UGU5 601 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 PIGRP01833 764 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 PGM1P36871 562 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 TFDP2Q14188 446 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 NUDCD3Q8IVD9 361 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 SRPK1Q96SB4 655 aaKnown RBP17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 MIS12Q9H081 205 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 AFG3L2Q9Y4W6 797 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 ADGRA2Q96PE1 1338 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 RAB6CQ53S08 254 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 RGS9BPQ6ZS82 235 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 HIC2Q96JB3 615 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 TWNKQ96RR1 684 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 RAB6CQ9H0N0 254 aa17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 MTO1Q9Y2Z2 717 aaKnown RBP17.15■□□□□ 0.34
CDC42EP4-201ENST00000335793 KRT36O76013 467 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 MICAL2O94851 1124 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 STIP1P31948 543 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 ASPAP45381 313 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 SLC18A1P54219 525 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 CBX3Q13185 183 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 CATSPERGQ6ZRH7 1159 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 PRPF39Q86UA1 669 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 ALYREFQ86V81 257 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 C7orf31Q8N865 590 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 SMC1BQ8NDV3 1235 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 CCDC110Q8TBZ0 833 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 PIM2Q9P1W9 311 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 ZNF510Q9Y2H8 683 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 LRRC42Q9Y546 428 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 SPDYE16A6NNV3 312 aaPredicted RBP17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 FCHO1O14526 889 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 NVLO15381 856 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 NFICP08651 508 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 YY1P25490 414 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 RBL1P28749 1068 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 ALDH18A1P54886 795 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 THOC5Q13769 683 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 MXD4Q14582 209 aaPredicted RBP17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 RASA2Q15283 850 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 WASHC2DQ5SRD0 308 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 C6orf163Q5TEZ5 329 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 MPZL3Q6UWV2 235 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 GADL1Q6ZQY3 521 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 XYLT1Q86Y38 959 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 ZNF395Q9H8N7 513 aaPredicted RBP17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 SAR1AQ9NR31 198 aa17.14■□□□□ 0.33
CDC42EP4-201ENST00000335793 ZNFX1Q9P2E3 1918 aaKnown RBP17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 MAGEB3O15480 346 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 MAFO75444 373 aaPredicted RBP17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 FARP2O94887 1054 aaPredicted RBP17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 PGK2P07205 417 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 CHI3L2Q15782 390 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 HSDL1Q3SXM5 330 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 LCA5Q86VQ0 697 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 NMD3Q96D46 503 aaKnown RBP17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 APOPT1Q96IL0 206 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 TRIM56Q9BRZ2 755 aaKnown RBP17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 KLC2Q9H0B6 622 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 CPSF3Q9UKF6 684 aaKnown RBP17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 C19orf81C9J6K1 198 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 CYB561D2O14569 222 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 TRUB2O95900 331 aaKnown RBP17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 ZNF24P17028 368 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 GPD1P21695 349 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 OAZ1P54368 228 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 SNX30Q5VWJ9 437 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 C4orf50Q6ZRC1 276 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 ZCCHC23Q6ZST2 131 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 NDUFAF2Q8N183 169 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 PCYT2Q99447 389 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 MIPEPQ99797 713 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 TUBB6Q9BUF5 446 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 NIFKQ9BYG3 293 aaKnown RBP17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 DMAP1Q9NPF5 467 aaPredicted RBP17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 PCDHGC3Q9UN70 934 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 GSC2O15499 205 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 WFS1O76024 890 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 SNRPAP09012 282 aaKnown RBP17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 HOXC6P09630 235 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 OSBPP22059 807 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 CDK16Q00536 496 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 EFCAB12Q6NXP0 572 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 SLC26A11Q86WA9 606 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 REPS2Q8NFH8 660 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 DTNBP1Q96EV8 351 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms