RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 PRUNE2Q8WUY3 3088 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 TRAV19A0A0A6YYK7 116 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 SOWAHDA6NJG2 315 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 TLR5O60602 858 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 GRAP2O75791 330 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 OAS1P00973 400 aaKnown RBP14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 CYLC1P35663 651 aaPredicted RBP14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 EFHC1Q5JVL4 640 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 OTOP3Q7RTS5 596 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 TMEM139Q8IV31 216 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 ARL14EPQ8N8R7 260 aaPredicted RBP14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 ATXN2LQ8WWM7 1075 aaKnown RBP14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 ACSF2Q96CM8 615 aaPredicted RBP14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 RPGRIP1Q96KN7 1286 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 NACA2Q9H009 215 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 ABCC13Q9NSE7 274 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 ASNSD1Q9NWL6 643 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 GDE1Q9NZC3 331 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 WDR35Q9P2L0 1181 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 NUDT5Q9UKK9 219 aa14.75□□□□□ -0.05
APOBEC3B-202ENST00000335760 SOBPA7XYQ1 873 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 CAPN9O14815 690 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 COCHO43405 550 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 SLC34A2O95436 690 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 FYNP06241 537 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 GLI1P08151 1106 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 PFKLP17858 780 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 HDCP19113 662 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 ABCB4P21439 1286 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 RRM1P23921 792 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 ATP5C1P36542 298 aaKnown RBP14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 SCNN1AP37088 669 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 TUBP50607 506 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 RNASE9P60153 205 aaKnown RBP14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 YWHAZP63104 245 aaKnown RBP14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 C10orf120Q5SQS8 335 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 RAD9BQ6WBX8 426 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 RSRC2Q7L4I2 434 aaKnown RBP14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 SLC26A9Q7LBE3 791 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 TADA2BQ86TJ2 420 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 TDRD5Q8NAT2 981 aaKnown RBP14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 ZSCAN18Q8TBC5 510 aaPredicted RBP14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 RNF139Q8WU17 664 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 KHSRPQ92945 711 aaKnown RBP eCLIP14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 ZNF653Q96CK0 615 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 TRIM11Q96F44 468 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 PDLIM2Q96JY6 352 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 SLC22A12Q96S37 553 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 CDK5RAP1Q96SZ6 601 aaKnown RBP14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 TRIM62Q9BVG3 475 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 RNF38Q9H0F5 515 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 POPDC2Q9HBU9 364 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 METTL5Q9NRN9 209 aaKnown RBP14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 CNOT8Q9UFF9 292 aaKnown RBP14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 ZMYM5Q9UJ78 669 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 USTQ9Y2C2 406 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 NR2E1Q9Y466 385 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 ZFP37Q9Y6Q3 630 aaPredicted RBP14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 COL6A3P12111 3177 aa14.74□□□□□ -0.05
APOBEC3B-202ENST00000335760 C2CD4DB7Z1M9 353 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 MDM4O15151 490 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 ATMINO43313 823 aaPredicted RBP14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 HSF2BPO75031 334 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 GJB6O95452 261 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 TBX18O95935 607 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 PTMAP06454 111 aaKnown RBP14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 CKMP06732 381 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 MYBL1P10243 752 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 MBL2P11226 248 aaPredicted RBP14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 LAMP2P13473 410 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 NCAM1P13591 858 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 AVPR1AP37288 418 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 GALCP54803 685 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 GSCP56915 257 aaPredicted RBP14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 MTF1Q14872 753 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 FAM78AQ5JUQ0 283 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 DNAJC24Q6P3W2 148 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 LRRC8AQ8IWT6 810 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 CMTM8Q8IZV2 173 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 DEFB106AQ8N104 65 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 ZNF276Q8N554 614 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 C3orf20Q8ND61 904 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 ASB2Q96Q27 587 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 SLC2A13Q96QE2 648 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 SELENOOQ9BVL4 669 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 SMG9Q9H0W8 520 aaKnown RBP14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 EPS15L1Q9UBC2 864 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 NAALADL1Q9UQQ1 740 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 EPN1Q9Y6I3 576 aaPredicted RBP14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 ANKRD62A6NC57 917 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 EIF3CLB5ME19 914 aaKnown RBP14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 ZNF263O14978 683 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 DAB1O75553 588 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 NDUFA10O95299 355 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 OLFM2O95897 454 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 H2AFZP0C0S5 128 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 GPC5P78333 572 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 EFEMP1Q12805 493 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 SPA17Q15506 151 aa14.73□□□□□ -0.05
APOBEC3B-202ENST00000335760 DCAF6Q58WW2 860 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms