RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 NARSO43776 548 aaKnown RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 SLC28A2O43868 658 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 ZIC2O95409 532 aaPredicted RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 NFICP08651 508 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 IFI6P09912 130 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PYGMP11217 842 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 FGF5P12034 268 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 MYL6BP14649 208 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CD46P15529 392 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 SCNN1AP37088 669 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CDKN1AP38936 164 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 THPOP40225 353 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 NOP2P46087 812 aaKnown RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 SLC6A12P48065 614 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CCL23P55773 120 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 JAM2P57087 298 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 POU3F1Q03052 451 aaPredicted RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CTDSPL2Q05D32 466 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CCDC85BQ15834 202 aaPredicted RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 UPP1Q16831 310 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 C11orf91Q3C1V1 193 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 LARP7Q4G0J3 582 aaKnown RBP eCLIP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 FAM209AQ5JX71 171 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CCDC181Q5TID7 509 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 TMEM81Q6P7N7 255 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PARM1Q6UWI2 310 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 ZPBP2Q6X784 338 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CEP68Q76N32 757 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 TRIM46Q7Z4K8 759 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 HEATR4Q86WZ0 1026 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 VPS37DQ86XT2 251 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 DND1Q8IYX4 353 aaKnown RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 SVOPQ8N4V2 548 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 LRRC52Q8N7C0 313 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 KBTBD3Q8NAB2 608 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CCDC112Q8NEF3 446 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PCDH19Q8TAB3 1148 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PPP4R1Q8TF05 950 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 SLCO2A1Q92959 643 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PNKPQ96T60 521 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CD180Q99467 661 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 AMBRA1Q9C0C7 1298 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 STRADBQ9C0K7 418 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 SLC26A1Q9H2B4 701 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PABPC3Q9H361 631 aaKnown RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 KCTD10Q9H3F6 313 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CLK4Q9HAZ1 481 aaKnown RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 FAM105AQ9NUU6 356 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 ZNF701Q9NV72 531 aaPredicted RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CEP72Q9P209 647 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PTGFRNQ9P2B2 879 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 EPHA6Q9UF33 1036 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 SUN2Q9UH99 717 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 DNPEPQ9ULA0 475 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PCDHA8Q9Y5H6 950 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 TANC2Q9HCD6 1990 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CCDC168Q8NDH2 2452 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 IGLV3-22A0A075B6J6 115 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 M0R2N6 131 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RFXAPO00287 272 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 PLRG1O43660 514 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 CD5LO43866 347 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 OAS1P00973 400 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 PSAPP07602 524 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 GIMD1P0DJR0 217 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 CSH1P0DML2 217 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 CSH2P0DML3 217 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 PLCG1P19174 1290 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 CNGA1P29973 690 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 GRIK1P39086 918 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RANGAP1P46060 587 aaPredicted RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 TDGF1P3P51864 188 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 KPNA1P52294 538 aaPredicted RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RBM5P52756 815 aaKnown RBP eCLIP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 OTUD4Q01804 1114 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 SRSF11Q05519 484 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 KCNA1Q09470 495 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 MRPL49Q13405 166 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 SEC23AQ15436 765 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ZNF672Q499Z4 452 aaPredicted RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 XKR3Q5GH77 459 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 FAM83BQ5T0W9 1011 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 SWT1Q5T5J6 900 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 PPP4R3AQ6IN85 833 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 MSANTD2Q6P1R3 559 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 FBXO42Q6P3S6 717 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 NOTUMQ6P988 496 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 FAM171BQ6P995 826 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 TMEM65Q6PI78 240 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 DHRS13Q6UX07 377 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 Q6ZS92 163 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ADGRG3Q86Y34 549 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 THNSL1Q8IYQ7 743 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 VPS52Q8N1B4 723 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 TOP6BLQ8N6T0 577 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 SMG8Q8ND04 991 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 TMIEQ8NEW7 156 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 OR2T34Q8NGX1 318 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 OR2T3Q8NH03 318 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ASB11Q8WXH4 323 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms