RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 RAVER2Q9HCJ3 691 aaKnown RBP14.25□□□□□ -0.13
SYNE3-201ENST00000334258 RAB6BQ9NRW1 208 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 TBC1D22BQ9NU19 505 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 RBAKQ9NYW8 714 aaPredicted RBP14.25□□□□□ -0.13
SYNE3-201ENST00000334258 ZC3H7BQ9UGR2 993 aaKnown RBP14.25□□□□□ -0.13
SYNE3-201ENST00000334258 ADAMTS6Q9UKP5 1117 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 AGO2Q9UKV8 859 aaKnown RBP14.25□□□□□ -0.13
SYNE3-201ENST00000334258 NFASCO94856 1347 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 WDR64B1ANS9 1081 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 EXTL3O43909 919 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 DDNO94850 711 aaPredicted RBP14.24□□□□□ -0.13
SYNE3-201ENST00000334258 ATP6V1B1P15313 513 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 COPAP53621 1224 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 SEZ6Q53EL9 994 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 FAM91A1Q658Y4 838 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 GPAT2Q6NUI2 795 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 ANO5Q75V66 913 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 RSPH3Q86UC2 560 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 CCDC106Q9BWC9 280 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 HBS1LQ9Y450 684 aaKnown RBP14.24□□□□□ -0.13
SYNE3-201ENST00000334258 A0A0B4J269 797 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 VNN1O95497 513 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 C4BPAP04003 597 aaKnown RBP14.24□□□□□ -0.13
SYNE3-201ENST00000334258 KRT7P08729 469 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 RAG1P15918 1043 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 NCF2P19878 526 aaPredicted RBP14.24□□□□□ -0.13
SYNE3-201ENST00000334258 GARTP22102 1010 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 RFC1P35251 1148 aaPredicted RBP14.24□□□□□ -0.13
SYNE3-201ENST00000334258 CHN2P52757 468 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 MAP3K21Q5TCX8 1036 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 PPP1R2P3Q6NXS1 205 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 ABTB1Q969K4 478 aaPredicted RBP14.24□□□□□ -0.13
SYNE3-201ENST00000334258 PTPRJQ12913 1337 aa14.24□□□□□ -0.13
SYNE3-201ENST00000334258 SMIM31A0A1B0GVY4 71 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 CXorf49A8MYA2 514 aaPredicted RBP14.23□□□□□ -0.13
SYNE3-201ENST00000334258 CD19P15391 556 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 EIF4BP23588 611 aaKnown RBP14.23□□□□□ -0.13
SYNE3-201ENST00000334258 TBXAS1P24557 533 aaPredicted RBP14.23□□□□□ -0.13
SYNE3-201ENST00000334258 TBCCQ15814 346 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 PABPC1LQ4VXU2 614 aaKnown RBP14.23□□□□□ -0.13
SYNE3-201ENST00000334258 RBM44Q6ZP01 1051 aaKnown RBP14.23□□□□□ -0.13
SYNE3-201ENST00000334258 EMC1Q8N766 993 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 MMP19Q99542 508 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 MRIQ9BWK5 157 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 XAB2Q9HCS7 855 aaKnown RBP14.23□□□□□ -0.13
SYNE3-201ENST00000334258 UGT1A9O60656 530 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 LYPLA2O95372 231 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 KRT3P12035 628 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 KYAT3Q6YP21 454 aaKnown RBP14.23□□□□□ -0.13
SYNE3-201ENST00000334258 BBS12Q6ZW61 710 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 LENG1Q96BZ8 264 aaPredicted RBP14.23□□□□□ -0.13
SYNE3-201ENST00000334258 DGCR14Q96DF8 476 aaKnown RBP14.23□□□□□ -0.13
SYNE3-201ENST00000334258 C20orf27Q9GZN8 174 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 UGT1A7Q9HAW7 530 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 UGT1A10Q9HAW8 530 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 UGT1A8Q9HAW9 530 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 IFT122Q9HBG6 1241 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 ANKEF1Q9NU02 776 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 GABBR1Q9UBS5 961 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 DNAJC16Q9Y2G8 782 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 CAPN8A6NHC0 703 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.23□□□□□ -0.13
SYNE3-201ENST00000334258 LYPLA1O75608 230 aaPredicted RBP14.23□□□□□ -0.13
SYNE3-201ENST00000334258 KRT38O76015 456 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 CLPTM1O96005 669 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 ASLP04424 464 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 ITGA2BP08514 1039 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 ZNF24P17028 368 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 KDELR1P24390 212 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 IL1R2P27930 398 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 INHBCP55103 352 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 TGFB2P61812 414 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 ROR1Q01973 937 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 FOLH1Q04609 750 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 PSMD6Q15008 389 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 WDR78Q5VTH9 848 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 C15orf39Q6ZRI6 1047 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 DEFB107AQ8IZN7 70 aa14.23□□□□□ -0.13
SYNE3-201ENST00000334258 ZBTB45Q96K62 511 aaPredicted RBP14.23□□□□□ -0.13
SYNE3-201ENST00000334258 C15orf38-AP3S2A0A0A6YYH1 394 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 TOP3BO95985 862 aaKnown RBP14.22□□□□□ -0.13
SYNE3-201ENST00000334258 MRPS9P82933 396 aaKnown RBP14.22□□□□□ -0.13
SYNE3-201ENST00000334258 MSLNQ13421 630 aaPredicted RBP14.22□□□□□ -0.13
SYNE3-201ENST00000334258 PEX6Q13608 980 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 HNRNPDQ14103 355 aaKnown RBP14.22□□□□□ -0.13
SYNE3-201ENST00000334258 CES4AQ5XG92 561 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 NPNTQ6UXI9 565 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 SCARA5Q6ZMJ2 495 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 SH2D5Q6ZV89 423 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 ARPINQ7Z6K5 226 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 PIP4K2CQ8TBX8 421 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 WRNIP1Q96S55 665 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 HERC5Q9UII4 1024 aaKnown RBP14.22□□□□□ -0.13
SYNE3-201ENST00000334258 TMX2Q9Y320 296 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 SPAG6O75602 509 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 ZMPSTE24O75844 475 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 CCNE2O96020 404 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 APRTP07741 180 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 NAT1P18440 290 aa14.22□□□□□ -0.13
SYNE3-201ENST00000334258 RGS2P41220 211 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms