RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 DNAJC9Q8WXX5 260 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 COPS5Q92905 334 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 KCNN1Q92952 543 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 MCUR1Q96AQ8 359 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 ALKBH8Q96BT7 664 aaKnown RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 CDCA5Q96FF9 252 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 OXNAD1Q96HP4 312 aaPredicted RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 CLPTM1LQ96KA5 538 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 HEXIM2Q96MH2 286 aaKnown RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 CDT1Q9H211 546 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 DCLRE1BQ9H816 532 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 USP29Q9HBJ7 922 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 ENO4A6NNW6 628 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 LACTBL1A8MY62 500 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 TBX10O75333 385 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 ENO1P06733 434 aaKnown RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 PGK2P07205 417 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 ESRRAP11474 423 aaPredicted RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 ATP6V1C1P21283 382 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 AMPD1P23109 780 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 GPD2P43304 727 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 BST1Q10588 318 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 C9orf131Q5VYM1 1079 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 CDCA2Q69YH5 1023 aaPredicted RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 JADE1Q6IE81 842 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 FAM183BPQ6ZVS7 135 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 MPP5Q8N3R9 675 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 NETO2Q8NC67 525 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 ZNF398Q8TD17 642 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 SYT15Q9BQS2 421 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 PTPRHQ9HD43 1115 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 ZFATQ9P243 1243 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 SLC17A6Q9P2U8 582 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 WASF2Q9Y6W5 498 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 NOP56O00567 594 aaKnown RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 CAPN9O14815 690 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 MED7O43513 233 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 SLC25A27O95847 323 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 CSH1P0DML2 217 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 CSH2P0DML3 217 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 EDNRBP24530 442 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 GRIA1P42261 906 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 IGBP1P78318 339 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 GRM1Q13255 1194 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 RCN2Q14257 317 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 IER5Q5VY09 327 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 CAND1Q86VP6 1230 aaKnown RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 ARID3BQ8IVW6 561 aaPredicted RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 UNC5BQ8IZJ1 945 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 SEPT1Q8WYJ6 367 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 MCRS1Q96EZ8 462 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 BCO2Q9BYV7 579 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 IQCGQ9H095 443 aaKnown RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 RSAD1Q9HA92 442 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 NGRNQ9NPE2 291 aaKnown RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 PIH1D1Q9NWS0 290 aaKnown RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 A6NHS1 94 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 H3BRJ5 948 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 TGFB3P10600 412 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 TFE3P19532 575 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-201ENST00000333371 IL4RP24394 825 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 KCTD2Q14681 263 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 PPP6R3Q5H9R7 873 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-201ENST00000333371 MROH9Q5TGP6 573 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 SNX30Q5VWJ9 437 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 DPY19L2Q6NUT2 758 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 CHSY1Q86X52 802 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 PLD5Q8N7P1 536 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-201ENST00000333371 UPF1Q92900 1129 aaKnown RBP eCLIP12.8□□□□□ -0.36
VPS33B-201ENST00000333371 TMEM176AQ96HP8 235 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 CPB2Q96IY4 423 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 RPF1Q9H9Y2 349 aaKnown RBP12.8□□□□□ -0.36
VPS33B-201ENST00000333371 POPDC2Q9HBU9 364 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 PCMTD2Q9NV79 361 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 ZC3H7BQ9UGR2 993 aaKnown RBP12.8□□□□□ -0.36
VPS33B-201ENST00000333371 CORO1CQ9ULV4 474 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-201ENST00000333371 PAPPA2Q9BXP8 1791 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 B4GALT4O60513 344 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 CILPO75339 1184 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 OSBPP22059 807 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 PROZP22891 400 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 ATXN1P54253 815 aaKnown RBP12.8□□□□□ -0.36
VPS33B-201ENST00000333371 TMPRSS15P98073 1019 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 KDSRQ06136 332 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 THOC5Q13769 683 aaKnown RBP12.8□□□□□ -0.36
VPS33B-201ENST00000333371 KRT81Q14533 505 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 CHI3L2Q15782 390 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 METTL7BQ6UX53 244 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 ZNF333Q96JL9 665 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 LPIN3Q9BQK8 851 aa12.8□□□□□ -0.36
VPS33B-201ENST00000333371 MTO1Q9Y2Z2 717 aaKnown RBP12.8□□□□□ -0.36
VPS33B-201ENST00000333371 B2RBV5 119 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 NDC80O14777 642 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 NVLO15381 856 aaKnown RBP12.79□□□□□ -0.36
VPS33B-201ENST00000333371 LUC7L3O95232 432 aaKnown RBP12.79□□□□□ -0.36
VPS33B-201ENST00000333371 GPD1P21695 349 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 GMPRP36959 345 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 ZNF143P52747 638 aaPredicted RBP12.79□□□□□ -0.36
VPS33B-201ENST00000333371 TSHZ1Q6ZSZ6 1077 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms