RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ARCQ7LC44 396 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 CCT6BQ92526 530 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 CENPIQ92674 756 aaPredicted RBP18.11■□□□□ 0.49
DDX28-201ENST00000332395 FAF2Q96CS3 445 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 SGSM3Q96HU1 749 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 APBA2Q99767 749 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 ADAM33Q9BZ11 813 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 DNAI2Q9GZS0 605 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 TRABDQ9H4I3 376 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 FGFR1OP2Q9NVK5 253 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 SENP1Q9P0U3 644 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 FETUBQ9UGM5 382 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 ZNF487B1APH4 448 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 KCNN4O15554 427 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 ACADSBP45954 432 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 ATXN1P54253 815 aaKnown RBP18.1■□□□□ 0.49
DDX28-201ENST00000332395 ACTN3Q08043 901 aaPredicted RBP18.1■□□□□ 0.49
DDX28-201ENST00000332395 KCNJ11Q14654 390 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 SPRED3Q2MJR0 410 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 NUGGCQ68CJ6 796 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 RTP4Q96DX8 246 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 TNIP3Q96KP6 325 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 HSFY1Q96LI6 401 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 MAGEB18Q96M61 343 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 KIF9Q9HAQ2 790 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 PAK5Q9P286 719 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 CFAP69A5D8W1 941 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 SNX3O60493 162 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 SPAG7O75391 227 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 MAP3K6O95382 1288 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 TKTP29401 623 aaKnown RBP18.1■□□□□ 0.49
DDX28-201ENST00000332395 EFTUD2Q15029 972 aaKnown RBP eCLIP18.1■□□□□ 0.49
DDX28-201ENST00000332395 DPYSL2Q16555 572 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 FAM228AQ86W67 206 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 OSTM1Q86WC4 334 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 PALM2Q8IXS6 379 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 B3GALNT2Q8NCR0 500 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 TGS1Q96RS0 853 aaKnown RBP18.1■□□□□ 0.49
DDX28-201ENST00000332395 ACSS3Q9H6R3 686 aa18.1■□□□□ 0.49
DDX28-201ENST00000332395 PTGESO14684 152 aa18.09■□□□□ 0.49
DDX28-201ENST00000332395 CHADO15335 359 aa18.09■□□□□ 0.49
DDX28-201ENST00000332395 PRPF4O43172 522 aaKnown RBP eCLIP18.09■□□□□ 0.49
DDX28-201ENST00000332395 ZBED1O96006 694 aa18.09■□□□□ 0.49
DDX28-201ENST00000332395 IGHA2P01877 340 aa18.09■□□□□ 0.49
DDX28-201ENST00000332395 CYP2F1P24903 491 aa18.09■□□□□ 0.49
DDX28-201ENST00000332395 RBL1P28749 1068 aa18.09■□□□□ 0.49
DDX28-201ENST00000332395 L1CAMP32004 1257 aa18.09■□□□□ 0.49
DDX28-201ENST00000332395 TOP6BLQ8N6T0 577 aa18.09■□□□□ 0.49
DDX28-201ENST00000332395 FBF1Q8TES7 1133 aa18.09■□□□□ 0.49
DDX28-201ENST00000332395 SOCS4Q8WXH5 440 aa18.09■□□□□ 0.49
DDX28-201ENST00000332395 SMC6Q96SB8 1091 aa18.09■□□□□ 0.49
DDX28-201ENST00000332395 DHX35Q9H5Z1 703 aaKnown RBP18.09■□□□□ 0.49
DDX28-201ENST00000332395 NRDE2Q9H7Z3 1164 aa18.09■□□□□ 0.49
DDX28-201ENST00000332395 ACTR5Q9H9F9 607 aaPredicted RBP18.09■□□□□ 0.49
DDX28-201ENST00000332395 RAB6BQ9NRW1 208 aa18.09■□□□□ 0.49
DDX28-201ENST00000332395 BCLAF3A2AJT9 711 aaKnown RBP18.08■□□□□ 0.49
DDX28-201ENST00000332395 CCT8L1PA6NM43 557 aa18.08■□□□□ 0.49
DDX28-201ENST00000332395 OAS1P00973 400 aaKnown RBP18.08■□□□□ 0.49
DDX28-201ENST00000332395 TSHRP16473 764 aa18.08■□□□□ 0.49
DDX28-201ENST00000332395 WARSP23381 471 aaKnown RBP18.08■□□□□ 0.49
DDX28-201ENST00000332395 WDR4P57081 412 aaKnown RBP18.08■□□□□ 0.49
DDX28-201ENST00000332395 KLHL38Q2WGJ6 581 aa18.08■□□□□ 0.49
DDX28-201ENST00000332395 FAM182AQ5T1J6 154 aa18.08■□□□□ 0.49
DDX28-201ENST00000332395 SYCP2LQ5T4T6 812 aa18.08■□□□□ 0.49
DDX28-201ENST00000332395 TAF2Q6P1X5 1199 aa18.08■□□□□ 0.49
DDX28-201ENST00000332395 ZFP42Q96MM3 310 aa18.08■□□□□ 0.49
DDX28-201ENST00000332395 KDM4CQ9H3R0 1056 aa18.08■□□□□ 0.49
DDX28-201ENST00000332395 AP4E1Q9UPM8 1137 aa18.08■□□□□ 0.49
DDX28-201ENST00000332395 CHMP2BQ9UQN3 213 aa18.08■□□□□ 0.49
DDX28-201ENST00000332395 DNM1LO00429 736 aa18.08■□□□□ 0.48
DDX28-201ENST00000332395 XPO1O14980 1071 aaKnown RBP18.08■□□□□ 0.48
DDX28-201ENST00000332395 LRPAP1P30533 357 aa18.08■□□□□ 0.48
DDX28-201ENST00000332395 SLC18A1P54219 525 aa18.08■□□□□ 0.48
DDX28-201ENST00000332395 IL9RQ01113 521 aa18.08■□□□□ 0.48
DDX28-201ENST00000332395 LACTB2Q53H82 288 aaPredicted RBP18.08■□□□□ 0.48
DDX28-201ENST00000332395 PIGZQ86VD9 579 aa18.08■□□□□ 0.48
DDX28-201ENST00000332395 C4orf33Q8N1A6 199 aa18.08■□□□□ 0.48
DDX28-201ENST00000332395 PPP1R10Q96QC0 940 aaKnown RBP18.08■□□□□ 0.48
DDX28-201ENST00000332395 PAFAH2Q99487 392 aa18.08■□□□□ 0.48
DDX28-201ENST00000332395 TACO1Q9BSH4 297 aaKnown RBP18.08■□□□□ 0.48
DDX28-201ENST00000332395 DHRS4Q9BTZ2 278 aa18.08■□□□□ 0.48
DDX28-201ENST00000332395 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.08■□□□□ 0.48
DDX28-201ENST00000332395 SMG5Q9UPR3 1016 aaKnown RBP18.08■□□□□ 0.48
DDX28-201ENST00000332395 MYADML2A6NDP7 307 aa18.07■□□□□ 0.48
DDX28-201ENST00000332395 TNPO2O14787 897 aaKnown RBP18.07■□□□□ 0.48
DDX28-201ENST00000332395 CHUKO15111 745 aa18.07■□□□□ 0.48
DDX28-201ENST00000332395 ATP2C2O75185 946 aa18.07■□□□□ 0.48
DDX28-201ENST00000332395 PIAS1O75925 651 aa18.07■□□□□ 0.48
DDX28-201ENST00000332395 ASMTLO95671 621 aa18.07■□□□□ 0.48
DDX28-201ENST00000332395 C6orf222P0C671 652 aaPredicted RBP18.07■□□□□ 0.48
DDX28-201ENST00000332395 AKR1A1P14550 325 aa18.07■□□□□ 0.48
DDX28-201ENST00000332395 ATP2A2P16615 1042 aaKnown RBP18.07■□□□□ 0.48
DDX28-201ENST00000332395 ELK3P41970 407 aa18.07■□□□□ 0.48
DDX28-201ENST00000332395 IGDCC3Q8IVU1 814 aa18.07■□□□□ 0.48
DDX28-201ENST00000332395 FUKQ8N0W3 1084 aa18.07■□□□□ 0.48
DDX28-201ENST00000332395 CCDC185Q8N715 623 aa18.07■□□□□ 0.48
DDX28-201ENST00000332395 DENND1AQ8TEH3 1009 aa18.07■□□□□ 0.48
DDX28-201ENST00000332395 HNRNPABQ99729 332 aaKnown RBP18.07■□□□□ 0.48
DDX28-201ENST00000332395 MTMR10Q9NXD2 777 aa18.07■□□□□ 0.48
DDX28-201ENST00000332395 A0A1W2PPM1 405 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms