RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ANKRD33Q7Z3H0 272 aa21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 PACS2Q86VP3 889 aa21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 THEM5Q8N1Q8 247 aa21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 SMARCD1Q96GM5 515 aa21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 FAM193BQ96PV7 902 aaPredicted RBP21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 FMO2Q99518 471 aa21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 HIPK3Q9H422 1215 aa21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 GPATCH2LQ9NWQ4 482 aa21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 PRG3Q9Y2Y8 225 aaPredicted RBP21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 DESP17661 470 aa21.14■□□□□ 0.98
RIPPLY3-201ENST00000329553 MATKP42679 507 aa21.14■□□□□ 0.98
RIPPLY3-201ENST00000329553 FAAP100Q0VG06 881 aa21.14■□□□□ 0.98
RIPPLY3-201ENST00000329553 PTK6Q13882 451 aa21.14■□□□□ 0.98
RIPPLY3-201ENST00000329553 ZC3H12AQ5D1E8 599 aaKnown RBP21.14■□□□□ 0.98
RIPPLY3-201ENST00000329553 BBS12Q6ZW61 710 aa21.14■□□□□ 0.98
RIPPLY3-201ENST00000329553 SPATS2Q86XZ4 545 aaKnown RBP21.14■□□□□ 0.98
RIPPLY3-201ENST00000329553 UBLCP1Q8WVY7 318 aaPredicted RBP21.14■□□□□ 0.98
RIPPLY3-201ENST00000329553 NCAPGQ9BPX3 1015 aa21.14■□□□□ 0.98
RIPPLY3-201ENST00000329553 CSNK1G1Q9HCP0 422 aa21.14■□□□□ 0.98
RIPPLY3-201ENST00000329553 ARHGEF37A1IGU5 675 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 HHLA1C9JL84 531 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 TMEM189-UBE2V1I3L0A0 370 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 NRP1O14786 923 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 BDNFP23560 247 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 IVDP26440 423 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 YWHAZP63104 245 aaKnown RBP21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 TTC31Q49AM3 519 aaPredicted RBP21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 RAB41Q5JT25 222 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 SPDYCQ5MJ68 293 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 AGBL2Q5U5Z8 902 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 RFX6Q8HWS3 928 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 ABI1Q8IZP0 508 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 TEKT4Q8WW24 435 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 APBB2Q92870 758 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 CASD1Q96PB1 797 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 TBCBQ99426 244 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 SNRNP25Q9BV90 132 aaKnown RBP21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 TXLNGYQ9BZA5 131 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 ULBP1Q9BZM6 244 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 CRISPLD2Q9H0B8 497 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 ASIC3Q9UHC3 531 aa21.14■□□□□ 0.97
RIPPLY3-201ENST00000329553 TLE2Q04725 743 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 YWHAHQ04917 246 aaPredicted RBP21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 DPYSL3Q14195 570 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 CA9Q16790 459 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 HFE2Q6ZVN8 426 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 ART4Q93070 314 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 PPP1R12CQ9BZL4 782 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 NRDE2Q9H7Z3 1164 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 SLC12A6Q9UHW9 1150 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 ZNF148Q9UQR1 794 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 DRG1Q9Y295 367 aaKnown RBP21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 TTC3P53804 2025 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 PPFIA2O75334 1257 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 GBP1P32455 592 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 DHX9Q08211 1270 aaKnown RBP21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 TRIM60Q495X7 471 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 DCAF6Q58WW2 860 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 PRUNE1Q86TP1 453 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 ACTL9Q8TC94 416 aa21.13■□□□□ 0.97
RIPPLY3-201ENST00000329553 TP73O15350 636 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 DAB1O75553 588 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 IL4RP24394 825 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 HPDP32754 393 aaPredicted RBP21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 OTUD4Q01804 1114 aaKnown RBP21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 OASLQ15646 514 aaKnown RBP21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 SLC25A52Q3SY17 297 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 CRIPAKQ8N1N5 446 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 SLC35B2Q8TB61 432 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 ZNF473Q8WTR7 871 aaKnown RBP21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 NKD2Q969F2 451 aaPredicted RBP21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 LRFN2Q9ULH4 789 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 DCDC2CA8MYV0 355 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 MDM4O15151 490 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 TADA2AO75478 443 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 FBXO21O94952 628 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 CYP2C18P33260 490 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 NOS2P35228 1153 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 VPS41P49754 854 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 VCPP55072 806 aaKnown RBP21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 DAOAP59103 153 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 PITX1P78337 314 aaPredicted RBP21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 TSPY1Q01534 308 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 LMNB2Q03252 620 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 KRT81Q14533 505 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 PDK2Q15119 407 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 ERMARDQ5T6L9 678 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 SYPL2Q5VXT5 272 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 ZNF365Q70YC5 407 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 STRADAQ7RTN6 431 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 GSTA5Q7RTV2 222 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 CTU1Q7Z7A3 348 aaKnown RBP21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 NLRP14Q86W24 1093 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 CCT8L2Q96SF2 557 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 CENPHQ9H3R5 247 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 CNGB3Q9NQW8 809 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 WHRNQ9P202 907 aa21.12■□□□□ 0.97
RIPPLY3-201ENST00000329553 YJEFN3A6XGL0 299 aa21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 E7ENQ6 273 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms