RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TLR6Q9Y2C9 796 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 PCDHA13Q9Y5I0 950 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 CCDC195A0A1B0GUA6 201 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 H3BRJ5 948 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 FGF10O15520 208 aaPredicted RBP5.4□□□□□ -1.54
LRIT3-201ENST00000327908 OLFM2O95897 454 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 RHOP08100 348 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 MMEP08473 750 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 SKILP12757 684 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 ABCB4P21439 1286 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 CYP2F1P24903 491 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 EIF2DP41214 584 aaKnown RBP5.4□□□□□ -1.54
LRIT3-201ENST00000327908 USP4Q13107 963 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 ASTE1Q2TB18 679 aaPredicted RBP5.4□□□□□ -1.54
LRIT3-201ENST00000327908 ZNF394Q53GI3 561 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 EFHC2Q5JST6 749 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 MPP7Q5T2T1 576 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 TAF3Q5VWG9 929 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 TAS1R1Q7RTX1 841 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 ZNF571Q7Z3V5 609 aaPredicted RBP5.4□□□□□ -1.54
LRIT3-201ENST00000327908 TMEM173Q86WV6 379 aaPredicted RBP5.4□□□□□ -1.54
LRIT3-201ENST00000327908 KCNV2Q8TDN2 545 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 SUSD6Q92537 303 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 FAM149B1Q96BN6 582 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 MSLNLQ96KJ4 702 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 ZNF830Q96NB3 372 aaPredicted RBP5.4□□□□□ -1.54
LRIT3-201ENST00000327908 EPAS1Q99814 870 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 ARID3AQ99856 593 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 HOMER3Q9NSC5 361 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 MTUS1Q9ULD2 1270 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 NENFQ9UMX5 172 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 EFR3BQ9Y2G0 817 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 SCN1AP35498 2009 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 CCDC66A2RUB6 948 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 HHLA1C9JL84 531 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 DDX3XO00571 662 aaKnown RBP eCLIP5.4□□□□□ -1.55
LRIT3-201ENST00000327908 CES2O00748 559 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 PRPSAP2O60256 369 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 ENDOD1O94919 500 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 ADH1CP00326 375 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 F11P03951 625 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 MYL4P12829 197 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 RARGP13631 454 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 MYOGP15173 224 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 CHRNB2P17787 502 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 GABRR2P28476 465 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 HCAR3P49019 387 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 ARID5AQ03989 594 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 TFDP2Q14188 446 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 SKIV2LQ15477 1246 aaKnown RBP5.4□□□□□ -1.55
LRIT3-201ENST00000327908 CHST9Q7L1S5 443 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 XYLT1Q86Y38 959 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 ATAD1Q8NBU5 361 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 HJURPQ8NCD3 748 aaPredicted RBP5.4□□□□□ -1.55
LRIT3-201ENST00000327908 MAFAQ8NHW3 353 aaPredicted RBP5.4□□□□□ -1.55
LRIT3-201ENST00000327908 TFAP2BQ92481 460 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 SMARCD2Q92925 531 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 KAT5Q92993 513 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 TWNKQ96RR1 684 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 OSBPL2Q9H1P3 480 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 ATXN3LQ9H3M9 355 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 DPEP3Q9H4B8 488 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 CATSPERBQ9H7T0 1116 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 FBRSQ9HAH7 460 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 ZFP14Q9HCL3 533 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.4□□□□□ -1.55
LRIT3-201ENST00000327908 MARCH2Q9P0N8 246 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 ARHGAP20Q9P2F6 1191 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 PTPRDP23468 1912 aa5.4□□□□□ -1.55
LRIT3-201ENST00000327908 ZNF840PA6NDX5 716 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 MAN2B1O00754 1011 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 TIMM44O43615 452 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 MOCS3O95396 460 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 MBL2P11226 248 aaPredicted RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 NFKBIAP25963 317 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 SERPINB6P35237 376 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 SCAPQ12770 1279 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 TAF10Q12962 218 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 GRIN2CQ14957 1233 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 GPR158Q5T848 1215 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 GJB7Q6PEY0 223 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 TRMT11Q7Z4G4 463 aaKnown RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 TTC13Q8NBP0 860 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 SMRP1Q8NCR6 262 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 ZNF564Q8TBZ8 553 aaPredicted RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 CASKIN2Q8WXE0 1202 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 ATP2A3Q93084 1043 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 HAUS1Q96CS2 278 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 BTN2A3PQ96KV6 586 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 C1orf74Q96LT6 269 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 XPO6Q96QU8 1125 aaKnown RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 NELL2Q99435 816 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 CORO1BQ9BR76 489 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 TTYH1Q9H313 450 aaPredicted RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 AMFRQ9UKV5 643 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 ZSCAN5CA6NGD5 496 aaPredicted RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 HIDE1A8MVS5 230 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 PROSCO94903 275 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 LCP1P13796 627 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 EPCAMP16422 314 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms