RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 MTBPQ96DY7 904 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 C7orf26Q96N11 449 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 BARX2Q9UMQ3 279 aaPredicted RBP20.66■□□□□ 0.9
SOX2-201ENST00000325404 H7C0C1 242 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 COPEO14579 308 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 GSC2O15499 205 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 B4GALT5O43286 388 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 HBP1O60381 514 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 TOMM70O94826 608 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 ATP5OP48047 213 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 OSTNP61366 133 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 YWHAZP63104 245 aaKnown RBP20.66■□□□□ 0.9
SOX2-201ENST00000325404 IFNLR1Q8IU57 520 aaPredicted RBP20.66■□□□□ 0.9
SOX2-201ENST00000325404 FBXO16Q8IX29 292 aaPredicted RBP20.66■□□□□ 0.9
SOX2-201ENST00000325404 PLD5Q8N7P1 536 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.66■□□□□ 0.9
SOX2-201ENST00000325404 BRI3BPQ8WY22 251 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 ARL8BQ9NVJ2 186 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 KCNK4Q9NYG8 393 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 ASB14A6NK59 587 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 NOP56O00567 594 aaKnown RBP20.65■□□□□ 0.9
SOX2-201ENST00000325404 SMNDC1O75940 238 aaKnown RBP eCLIP20.65■□□□□ 0.9
SOX2-201ENST00000325404 PDGFRAP16234 1089 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 ATP6V1C1P21283 382 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 MMRN1Q13201 1228 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 TMEM132AQ24JP5 1023 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 SLC9A4Q6AI14 798 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 NPNTQ6UXI9 565 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 ANKRD23Q86SG2 305 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 KLC2Q9H0B6 622 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 SMARCAD1Q9H4L7 1026 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 RRAGCQ9HB90 399 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 RAB6BQ9NRW1 208 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 STOML1Q9UBI4 398 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 HMGXB4Q9UGU5 601 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 CELF2O95319 508 aaKnown RBP20.65■□□□□ 0.9
SOX2-201ENST00000325404 ITGB3P05106 788 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 STAG3L1P0CL83 205 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 JADE1Q6IE81 842 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 ZC3H18Q86VM9 953 aaKnown RBP20.65■□□□□ 0.9
SOX2-201ENST00000325404 HEXIM2Q96MH2 286 aaKnown RBP20.65■□□□□ 0.9
SOX2-201ENST00000325404 SRPK1Q96SB4 655 aaKnown RBP20.65■□□□□ 0.9
SOX2-201ENST00000325404 TRIM6Q9C030 488 aaPredicted RBP20.65■□□□□ 0.9
SOX2-201ENST00000325404 IQCGQ9H095 443 aaKnown RBP20.65■□□□□ 0.9
SOX2-201ENST00000325404 POPDC2Q9HBU9 364 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 PLLPQ9Y342 182 aa20.65■□□□□ 0.9
SOX2-201ENST00000325404 GPR25O00155 361 aa20.64■□□□□ 0.9
SOX2-201ENST00000325404 PIAS1O75925 651 aa20.64■□□□□ 0.9
SOX2-201ENST00000325404 GCLCP48506 637 aaPredicted RBP20.64■□□□□ 0.9
SOX2-201ENST00000325404 ZBTB16Q05516 673 aa20.64■□□□□ 0.9
SOX2-201ENST00000325404 HSDL1Q3SXM5 330 aa20.64■□□□□ 0.9
SOX2-201ENST00000325404 NLRP4Q96MN2 994 aa20.64■□□□□ 0.9
SOX2-201ENST00000325404 C12orf65Q9H3J6 166 aaKnown RBP20.64■□□□□ 0.9
SOX2-201ENST00000325404 APOL1O14791 398 aa20.64■□□□□ 0.89
SOX2-201ENST00000325404 ACADSP16219 412 aa20.64■□□□□ 0.89
SOX2-201ENST00000325404 BGNP21810 368 aa20.64■□□□□ 0.89
SOX2-201ENST00000325404 IL4RP24394 825 aa20.64■□□□□ 0.89
SOX2-201ENST00000325404 SERPINB3P29508 390 aa20.64■□□□□ 0.89
SOX2-201ENST00000325404 PHKA2P46019 1235 aa20.64■□□□□ 0.89
SOX2-201ENST00000325404 KRT81Q14533 505 aa20.64■□□□□ 0.89
SOX2-201ENST00000325404 ATG16L1Q676U5 607 aa20.64■□□□□ 0.89
SOX2-201ENST00000325404 CCDC62Q6P9F0 684 aa20.64■□□□□ 0.89
SOX2-201ENST00000325404 NT5DC4Q86YG4 428 aa20.64■□□□□ 0.89
SOX2-201ENST00000325404 TMEM192Q8IY95 271 aa20.64■□□□□ 0.89
SOX2-201ENST00000325404 TAB3Q8N5C8 712 aaPredicted RBP20.64■□□□□ 0.89
SOX2-201ENST00000325404 TTC17Q96AE7 1141 aa20.64■□□□□ 0.89
SOX2-201ENST00000325404 OXNAD1Q96HP4 312 aaPredicted RBP20.64■□□□□ 0.89
SOX2-201ENST00000325404 ZC3H7BQ9UGR2 993 aaKnown RBP20.64■□□□□ 0.89
SOX2-201ENST00000325404 TRIM49D1C9J1S8 452 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 GYG2O15488 501 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 PTDSS1P48651 473 aaKnown RBP20.63■□□□□ 0.89
SOX2-201ENST00000325404 DBN1Q16643 649 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 TSNAXIP1Q2TAA8 658 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 TRNP1Q6NT89 227 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 EFCAB12Q6NXP0 572 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 CYS1Q717R9 158 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 APLFQ8IW19 511 aaPredicted RBP20.63■□□□□ 0.89
SOX2-201ENST00000325404 DHX37Q8IY37 1157 aaKnown RBP20.63■□□□□ 0.89
SOX2-201ENST00000325404 KCNV2Q8TDN2 545 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 HPDLQ96IR7 371 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 ITGA11Q9UKX5 1188 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 MDM4O15151 490 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 ENTPD5O75356 428 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 SETSIPP0DME0 302 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 NEFHP12036 1026 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 MAGEA3P43357 314 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 CAND1Q86VP6 1230 aaKnown RBP20.63■□□□□ 0.89
SOX2-201ENST00000325404 TRIM50Q86XT4 487 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 ARHGAP24Q8N264 748 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 PQLC3Q8N755 202 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 TTC8Q8TAM2 541 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 ZNF670Q9BS34 389 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 MINDY3Q9H8M7 445 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 IFT122Q9HBG6 1241 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 ETNK2Q9NVF9 386 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 SIRPGQ9P1W8 387 aa20.63■□□□□ 0.89
SOX2-201ENST00000325404 A6NHS1 94 aa20.62■□□□□ 0.89
SOX2-201ENST00000325404 I3L4J1 428 aa20.62■□□□□ 0.89
SOX2-201ENST00000325404 KCNN4O15554 427 aa20.62■□□□□ 0.89
SOX2-201ENST00000325404 KRT38O76015 456 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms