RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 RAB33AQ14088 237 aa18.86■□□□□ 0.61
SYNE4-201ENST00000324444 PLPP4Q5VZY2 271 aa18.86■□□□□ 0.61
SYNE4-201ENST00000324444 LLGL2Q6P1M3 1020 aa18.86■□□□□ 0.61
SYNE4-201ENST00000324444 CC2D1AQ6P1N0 951 aaPredicted RBP18.86■□□□□ 0.61
SYNE4-201ENST00000324444 PRSS55Q6UWB4 352 aaPredicted RBP18.86■□□□□ 0.61
SYNE4-201ENST00000324444 RSPO2Q6UXX9 243 aaPredicted RBP18.86■□□□□ 0.61
SYNE4-201ENST00000324444 GJD3Q8N144 294 aa18.86■□□□□ 0.61
SYNE4-201ENST00000324444 NUP93Q8N1F7 819 aa18.86■□□□□ 0.61
SYNE4-201ENST00000324444 ZNF461Q8TAF7 563 aa18.86■□□□□ 0.61
SYNE4-201ENST00000324444 RXFP2Q8WXD0 754 aa18.86■□□□□ 0.61
SYNE4-201ENST00000324444 FAM149B1Q96BN6 582 aa18.86■□□□□ 0.61
SYNE4-201ENST00000324444 CDCA3Q99618 268 aaPredicted RBP18.86■□□□□ 0.61
SYNE4-201ENST00000324444 TCF25Q9BQ70 676 aa18.86■□□□□ 0.61
SYNE4-201ENST00000324444 ULBP1Q9BZM6 244 aa18.86■□□□□ 0.61
SYNE4-201ENST00000324444 NGRNQ9NPE2 291 aaKnown RBP18.86■□□□□ 0.61
SYNE4-201ENST00000324444 CD207Q9UJ71 328 aa18.86■□□□□ 0.61
SYNE4-201ENST00000324444 USP3Q9Y6I4 520 aa18.86■□□□□ 0.61
SYNE4-201ENST00000324444 PIK3R2O00459 728 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 CAPN9O14815 690 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 LILRB3O75022 631 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 ELF1P32519 619 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 MATKP42679 507 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 SSR1P43307 286 aaKnown RBP18.85■□□□□ 0.61
SYNE4-201ENST00000324444 TERF1P54274 439 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 ROR1Q01973 937 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 ADCY1Q08828 1119 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 SEL1L2Q5TEA6 688 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 JOSD2Q8TAC2 188 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 MAIP1Q8WWC4 291 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 KHSRPQ92945 711 aaKnown RBP eCLIP18.85■□□□□ 0.61
SYNE4-201ENST00000324444 DDX23Q9BUQ8 820 aaKnown RBP18.85■□□□□ 0.61
SYNE4-201ENST00000324444 EMILIN2Q9BXX0 1053 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 GOLPH3Q9H4A6 298 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 RXFP1Q9HBX9 757 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 CLEC1BQ9P126 229 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 TTC7AQ9ULT0 858 aaPredicted RBP18.85■□□□□ 0.61
SYNE4-201ENST00000324444 USTQ9Y2C2 406 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 MYH10P35580 1976 aa18.85■□□□□ 0.61
SYNE4-201ENST00000324444 CTAGE15A4D2H0 777 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 DDX3YO15523 660 aaKnown RBP18.84■□□□□ 0.61
SYNE4-201ENST00000324444 MBTPS2O43462 519 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 GABBR2O75899 941 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 GLP2RO95838 553 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 C1RP00736 705 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 CTAGE8P0CG41 777 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 PSEN1P49768 467 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 SMAD4Q13485 552 aaKnown RBP18.84■□□□□ 0.61
SYNE4-201ENST00000324444 MGAT5BQ3V5L5 792 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 RNF19BQ6ZMZ0 732 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 STRADAQ7RTN6 431 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 CTAGE6Q86UF2 777 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 CTAGE4Q8IX94 777 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 ACTRT1Q8TDG2 376 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 RBM41Q96IZ5 413 aaKnown RBP18.84■□□□□ 0.61
SYNE4-201ENST00000324444 MSLNLQ96KJ4 702 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 CLSTN3Q9BQT9 956 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 TRIM7Q9C029 511 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 EPHX3Q9H6B9 360 aa18.84■□□□□ 0.61
SYNE4-201ENST00000324444 PACSIN2Q9UNF0 486 aaPredicted RBP18.84■□□□□ 0.61
SYNE4-201ENST00000324444 C2CD2LO14523 706 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 RIOK3O14730 519 aaKnown RBP18.83■□□□□ 0.61
SYNE4-201ENST00000324444 ABLIM3O94929 683 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 GJB6O95452 261 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 F9P00740 461 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 LTFP02788 710 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 SRGAP2BP0DMP2 458 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 ATF2P15336 505 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 PEX5P50542 639 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 SLC5A3P53794 718 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 CACNA2D1P54289 1103 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 RBM10P98175 930 aaKnown RBP18.83■□□□□ 0.61
SYNE4-201ENST00000324444 ITIH3Q06033 890 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 PLD1Q13393 1074 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 SMC1AQ14683 1233 aaKnown RBP18.83■□□□□ 0.61
SYNE4-201ENST00000324444 SMAD2Q15796 467 aaKnown RBP18.83■□□□□ 0.61
SYNE4-201ENST00000324444 DUSP6Q16828 381 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 SLC25A52Q3SY17 297 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 DENND5BQ6ZUT9 1274 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 TMC7Q7Z402 723 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 KATNAL2Q8IYT4 538 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 RCOR2Q8IZ40 523 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 EMC1Q8N766 993 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 ATAD1Q8NBU5 361 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 PGLYRP2Q96PD5 576 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 SLC2A13Q96QE2 648 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 TBCBQ99426 244 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 C1QTNF1Q9BXJ1 281 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 ABCC13Q9NSE7 274 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 PRKAG3Q9UGI9 489 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 SCML2Q9UQR0 700 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 IRAK3Q9Y616 596 aa18.83■□□□□ 0.61
SYNE4-201ENST00000324444 WDR27A2RRH5 827 aa18.82■□□□□ 0.6
SYNE4-201ENST00000324444 HIDE1A8MVS5 230 aa18.82■□□□□ 0.6
SYNE4-201ENST00000324444 PGRMC1O00264 195 aaKnown RBP18.82■□□□□ 0.6
SYNE4-201ENST00000324444 TNFRSF10BO14763 440 aa18.82■□□□□ 0.6
SYNE4-201ENST00000324444 ADAM12O43184 909 aa18.82■□□□□ 0.6
SYNE4-201ENST00000324444 PRPSAP2O60256 369 aa18.82■□□□□ 0.6
SYNE4-201ENST00000324444 CEP104O60308 925 aa18.82■□□□□ 0.6
SYNE4-201ENST00000324444 ZRANB2O95218 330 aaKnown RBP eCLIP18.82■□□□□ 0.6
SYNE4-201ENST00000324444 USP17L7P0C7H9 530 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms