RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 STK36Q9NRP7 1315 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 CYP27B1O15528 508 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 HLA-DRAP01903 254 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 DBTP11182 482 aaKnown RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 BMPR2Q13873 1038 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 WASHC2DQ5SRD0 308 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 DCLRE1BQ9H816 532 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 AVENQ9NQS1 362 aaPredicted RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 KLHL1Q9NR64 748 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 ADAM30Q9UKF2 790 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 UNC13CQ8NB66 2214 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 FYNP06241 537 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 TALDO1P37837 337 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 SLC34A1Q06495 639 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 SLC18A3Q16572 532 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 PHACTR4Q8IZ21 702 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 FAM192AQ9GZU8 254 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 RUVBL2Q9Y230 463 aaKnown RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 PCDHB7Q9Y5E2 793 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 PCDHGA3Q9Y5H0 932 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 FAM86B2P0C5J1 330 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 ATP4AP20648 1035 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 MICALL2Q8IY33 904 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 HASPINQ8TF76 798 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 GPRC5DQ9NZD1 345 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 TRMT6Q9UJA5 497 aaKnown RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 ALG6Q9Y672 507 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 ADAMTS12P58397 1594 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 ITGA4P13612 1032 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 SLC25A24Q6NUK1 477 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 STOX1Q6ZVD7 989 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 NT5DC3Q86UY8 548 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 SLC13A5Q86YT5 568 aaPredicted RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 RXFP1Q9HBX9 757 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 MED12Q93074 2177 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 METP08581 1390 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 E7ENQ6 273 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 ADCY6O43306 1168 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 CNOT3O75175 753 aaKnown RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 HOXD10P28358 340 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 MAGEA10P43363 369 aaPredicted RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 BAATQ14032 418 aaPredicted RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 ATF7IP2Q5U623 682 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 C11orf63Q6NUN7 778 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 ENOSF1Q7L5Y1 443 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 GUF1Q8N442 669 aaKnown RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 NDUFA13Q9P0J0 144 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 LIMD1Q9UGP4 676 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 SLC9A8Q9Y2E8 581 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 MROH7Q68CQ1 1323 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 SLC16A3O15427 465 aaKnown RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 TOR3AQ9H497 397 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 KDM5CP41229 1560 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 TRMT5Q32P41 509 aaKnown RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 MARK4Q96L34 752 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 SERPINB12Q96P63 405 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 EPB41L1Q9H4G0 881 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 NRDE2Q9H7Z3 1164 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 GRID1Q9ULK0 1009 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 EME2A4GXA9 379 aaPredicted RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 TRAPPC3O43617 180 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 EYA4O95677 639 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 POLBP06746 335 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 GALK1P51570 392 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 EFNA5P52803 228 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 RBBP4Q09028 425 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 NFYCQ13952 458 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 TMEM63BQ5T3F8 832 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 MIB1Q86YT6 1006 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 PPIL6Q8IXY8 311 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 TFB1MQ8WVM0 346 aaKnown RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 ZKSCAN4Q969J2 545 aaPredicted RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 HPDLQ96IR7 371 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 CATSPERBQ9H7T0 1116 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 TRMT13Q9NUP7 481 aaKnown RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 EIF3LQ9Y262 564 aaKnown RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 PIK3R1P27986 724 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 USP11P51784 963 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 IFI35P80217 286 aaPredicted RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 DPYDQ12882 1025 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 SPANXN2Q5MJ10 180 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 TAF2Q6P1X5 1199 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 APLFQ8IW19 511 aaPredicted RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 ARHGEF19Q8IW93 802 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 ATP8B4Q8TF62 1192 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 KATNAL1Q9BW62 490 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 UBE2OQ9C0C9 1292 aaKnown RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 RPS6KB2Q9UBS0 482 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 BTBD3Q9Y2F9 522 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 TCOF1Q13428 1488 aaKnown RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 A0A0G2JLW4 131 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 A0A1W2PRG6 482 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 RAD51BO15315 384 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 MTRF1O75570 445 aaKnown RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 RABL6Q3YEC7 729 aaPredicted RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 GORASP1Q9BQQ3 440 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 BTBD10Q9BSF8 475 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 ARMC7Q9H6L4 198 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 PADI4Q9UM07 663 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 LAMC1P11047 1609 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms