RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 LRRC45Q96CN5 670 aa9.51□□□□□ -0.89
CD46-202ENST00000322918 DDX56Q9NY93 547 aaKnown RBP9.51□□□□□ -0.89
CD46-202ENST00000322918 TBK1Q9UHD2 729 aa9.51□□□□□ -0.89
CD46-202ENST00000322918 ATP11BQ9Y2G3 1177 aa9.51□□□□□ -0.89
CD46-202ENST00000322918 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.51□□□□□ -0.89
CD46-202ENST00000322918 C3orf70A6NLC5 250 aaPredicted RBP9.5□□□□□ -0.89
CD46-202ENST00000322918 TADA2AO75478 443 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 CABYRO75952 493 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 RBP3P10745 1247 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 ODC1P11926 461 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 GRIK1P39086 918 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 TUSC3Q13454 348 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 CLUL1Q15846 466 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 PPP2R5EQ16537 467 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 SLC39A12Q504Y0 691 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 SLC24A5Q71RS6 500 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 DIS3LQ8TF46 1054 aaKnown RBP9.5□□□□□ -0.89
CD46-202ENST00000322918 LRFN2Q9ULH4 789 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 WARSP23381 471 aaKnown RBP9.5□□□□□ -0.89
CD46-202ENST00000322918 TNFRSF8P28908 595 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 GPR15P49685 360 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 YWHAZP63104 245 aaKnown RBP9.5□□□□□ -0.89
CD46-202ENST00000322918 DSC3Q14574 896 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 CYP1B1Q16678 543 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 TCTN1Q2MV58 587 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 NOMO2Q5JPE7 1267 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 ANKMY2Q8IV38 441 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 IQCKQ8N0W5 287 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 GRK7Q8WTQ7 553 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 MAIP1Q8WWC4 291 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 RSPH1Q8WYR4 309 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 P3H4Q92791 437 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 SNF8Q96H20 258 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 FAM107BQ9H098 131 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 PRDM5Q9NQX1 630 aaPredicted RBP9.5□□□□□ -0.89
CD46-202ENST00000322918 TBC1D13Q9NVG8 400 aa9.5□□□□□ -0.89
CD46-202ENST00000322918 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.5□□□□□ -0.89
CD46-202ENST00000322918 CCL5P13501 91 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 GOT1P17174 413 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 AMPD1P23109 780 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 HSPA9P38646 679 aaKnown RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 LHX1P48742 406 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 YWHAHQ04917 246 aaPredicted RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 DPYSL3Q14195 570 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 DDR2Q16832 855 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 LONRF1Q17RB8 773 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 FAM171A1Q5VUB5 890 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 DENND2CQ68D51 928 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 ARHGAP17Q68EM7 881 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 NIPA2Q8N8Q9 360 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 EPS8L3Q8TE67 593 aaKnown RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 HNRNPABQ99729 332 aaKnown RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 RTP3Q9BQQ7 232 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 SIK2Q9H0K1 926 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 VIPAS39Q9H9C1 493 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 ETNK2Q9NVF9 386 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 PIH1D1Q9NWS0 290 aaKnown RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 SEPT10Q9P0V9 454 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 NOVA2Q9UNW9 492 aaKnown RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 AP4E1Q9UPM8 1137 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 SLC27A5Q9Y2P5 690 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 FAM169AQ9Y6X4 670 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 C9IYK1 514 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 XPO1O14980 1071 aaKnown RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 OPA1O60313 960 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 MYZAPP0CAP1 466 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 SETSIPP0DME0 302 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 SELPP16109 830 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 DESP17661 470 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 RAB27AP51159 221 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 SATB1Q01826 763 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 ZNF844Q08AG5 666 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 GRIK3Q13003 919 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 FASTKD3Q14CZ7 662 aaKnown RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 CYP4V2Q6ZWL3 525 aaPredicted RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 TTC9BQ8N6N2 239 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 ATAD1Q8NBU5 361 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 ZMIZ2Q8NF64 920 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 FAM76AQ8TAV0 307 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 DDIT4Q9NX09 232 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 MAGED2Q9UNF1 606 aaPredicted RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 PCDHB7Q9Y5E2 793 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 GABRDO14764 452 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 MCF2LO15068 1137 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 KCNN4O15554 427 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 ZNF623O75123 536 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 MOCS2O96007 188 aaPredicted RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 AMHP03971 560 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 CA8P35219 290 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 PGFP49763 221 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 VCPP55072 806 aaKnown RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 MRPS5P82675 430 aaKnown RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 GBE1Q04446 702 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 MRPL10Q7Z7H8 261 aaKnown RBP9.49□□□□□ -0.89
CD46-202ENST00000322918 TP53INP2Q8IXH6 220 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 MYCBPAPQ8TBZ2 947 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 HIPK3Q9H422 1215 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 PCDH18Q9HCL0 1135 aa9.49□□□□□ -0.89
CD46-202ENST00000322918 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.49□□□□□ -0.892e-10■■■□□ 19.2
CD46-202ENST00000322918 CASP8AP2Q9UKL3 1982 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms