RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 MCUR1Q96AQ8 359 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 PIWIL1Q96J94 861 aaKnown RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 NFKBIZQ9BYH8 718 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 ASCC2Q9H1I8 757 aaPredicted RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 MINDY3Q9H8M7 445 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 SMYD2Q9NRG4 433 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 PIM2Q9P1W9 311 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 BTBD7Q9P203 1132 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 STX18Q9P2W9 335 aaKnown RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 FAM237BA0A1B0GVD1 139 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 FAM159BA6NKW6 160 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 A8MXQ7 604 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 LACTBL1A8MY62 500 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 I3L4J1 428 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 INO80B-WBP1J3KQ70 363 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 PEX10O60683 326 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 MAGEC1O60732 1142 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 SNNO75324 88 aaPredicted RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 ARIH2O95376 493 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 STAU1O95793 577 aaKnown RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 APOEP02649 317 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 ATP5BP06576 529 aaKnown RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 GJB1P08034 283 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 IQCF3P0C7M6 154 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 OSBPP22059 807 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 RBL1P28749 1068 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 SLC34A1Q06495 639 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 FAM187BQ17R55 369 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 C15orf59Q2T9L4 293 aaPredicted RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 MUM1Q2TAK8 710 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 HSDL1Q3SXM5 330 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 BOLA3Q53S33 107 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 SYCP2LQ5T4T6 812 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 LGSNQ5TDP6 509 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 SNX30Q5VWJ9 437 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 MAP1SQ66K74 1059 aaPredicted RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 ZNF772Q68DY9 489 aaPredicted RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 JADE1Q6IE81 842 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 C1orf228Q6PIY5 440 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 LCLAT1Q6UWP7 414 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 C4orf22Q6V702 233 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 FAM183BPQ6ZVS7 135 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 ZNF534Q76KX8 674 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 ALYREFQ86V81 257 aaKnown RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 CDR2LQ86X02 465 aaPredicted RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 TREML1Q86YW5 311 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 APOBEC3FQ8IUX4 373 aaKnown RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 MAP7D3Q8IWC1 876 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 ARHGAP24Q8N264 748 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 PCDH19Q8TAB3 1148 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 MTBPQ96DY7 904 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 TBCBQ99426 244 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 INO80BQ9C086 356 aaPredicted RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 MIS12Q9H081 205 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 IQCGQ9H095 443 aaKnown RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 KLC2Q9H0B6 622 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 ASB7Q9H672 318 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 GBA2Q9HCG7 927 aaPredicted RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 PCDH18Q9HCL0 1135 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 ETNK2Q9NVF9 386 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 KIAA1257Q9ULG3 409 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 BARX2Q9UMQ3 279 aaPredicted RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 LRCH1Q9Y2L9 728 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 EVPLQ92817 2033 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 HMX2A2RU54 273 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 DPPA5A6NC42 116 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 F8W8V4 182 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 SOCS7O14512 581 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 APOL1O14791 398 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 CAPN9O14815 690 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 BIRC5O15392 142 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 TBX10O75333 385 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 KRT38O76015 456 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 PFKMP08237 780 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 STAG3L1P0CL83 205 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 CSH1P0DML2 217 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 CSH2P0DML3 217 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 MCF2P10911 925 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 NEFHP12036 1026 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 P4HA1P13674 534 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 GCLCP48506 637 aaPredicted RBP9.03□□□□□ -0.96
CLK1-201ENST00000321356 CCNHP51946 323 aaPredicted RBP9.03□□□□□ -0.96
CLK1-201ENST00000321356 BCAR1P56945 870 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 EN1Q05925 392 aaPredicted RBP9.03□□□□□ -0.96
CLK1-201ENST00000321356 KLC1Q07866 573 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 AMHR2Q16671 573 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 CCDC14Q49A88 953 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 CELF3Q5SZQ8 465 aaKnown RBP9.03□□□□□ -0.96
CLK1-201ENST00000321356 ATG16L1Q676U5 607 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 IRGCQ6NXR0 463 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 UNC5AQ6ZN44 842 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 TMPRSS6Q8IU80 811 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 CTAGE3PQ8IX95 158 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 ARMC2Q8NEN0 867 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 UBA3Q8TBC4 463 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 E2F7Q96AV8 911 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 SIGLEC10Q96LC7 697 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 NLRP4Q96MN2 994 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 ZNF670Q9BS34 389 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms