RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 LRRC42Q9Y546 428 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 TGDSO95455 350 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 KLRC2P26717 231 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 OCRLQ01968 901 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 GOLGA7BQ2TAP0 167 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 C16orf46Q6P387 395 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 ZPBP2Q6X784 338 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 RINLQ6ZS11 566 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 ARHGAP22Q7Z5H3 698 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 SETD3Q86TU7 594 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 VSIG10LQ86VR7 867 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 SULF1Q8IWU6 871 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 RBM15BQ8NDT2 890 aaKnown RBP13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 SLC44A1Q8WWI5 657 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 OPTNQ96CV9 577 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 CNBD2Q96M20 576 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 FIZ1Q96SL8 496 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 TASP1Q9H6P5 420 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 LNPEPQ9UIQ6 1025 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 LRP5O75197 1615 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 SERPINB5P36952 375 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 ITGA9Q13797 1035 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 ARMCX2Q7L311 632 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 LRRC39Q96DD0 335 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 TMEM176AQ96HP8 235 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 ZNF333Q96JL9 665 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 SPATA33Q96N06 139 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 NRDE2Q9H7Z3 1164 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 COL20A1Q9P218 1284 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 ZNRF3Q9ULT6 936 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 SNCAIPQ9Y6H5 919 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 ANKRD36CQ5JPF3 1778 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 AVILO75366 819 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 C4BPAP04003 597 aaKnown RBP13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 THRAP10827 490 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 CPA3P15088 417 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 RTP1P59025 263 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 CYLC2Q14093 348 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 R3HDM1Q15032 1099 aaKnown RBP13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 MPZL3Q6UWV2 235 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 SIAH1Q8IUQ4 282 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 TFB1MQ8WVM0 346 aaKnown RBP13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 NAT9Q9BTE0 207 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 ILKAPQ9H0C8 392 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 PORCNQ9H237 461 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 SORCS3Q9UPU3 1222 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 EFR3BQ9Y2G0 817 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 UMODL1Q5DID0 1318 aa13.18□□□□□ -0.3
DNMT3A-202ENST00000321117 SPDYE5A6NIY4 337 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 MAGEB2O15479 319 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 OAS1P00973 400 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 RAG1P15918 1043 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 FDFT1P37268 417 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 POU5F1BQ06416 359 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 NME3Q13232 169 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 ACAP1Q15027 740 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 KYAT3Q6YP21 454 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 TTC7BQ86TV6 843 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 BANPQ8N9N5 519 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 CRYGNQ8WXF5 182 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 INPP5FQ9Y2H2 1132 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 PRR5-ARHGAP8B1AHC4 643 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 ASS1P00966 412 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 FESP07332 822 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 MCF2P10911 925 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 TGM2P21980 687 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 ARHGAP8P85298 464 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 ITKQ08881 620 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 MMRN1Q13201 1228 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 TEDDM1Q5T9Z0 273 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 CWF19L1Q69YN2 538 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 ASRGL1Q7L266 308 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 CCNJLQ8IV13 435 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 OR6Y1Q8NGX8 325 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 JOSD2Q8TAC2 188 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 UCMAQ8WVF2 138 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 SIKE1Q9BRV8 207 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 CCDC78A2IDD5 438 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 DCXO43602 365 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 DNAJC6O75061 913 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 HNRNPCP07910 306 aaKnown RBP eCLIP13.17□□□□□ -0.31e-7■■□□□ 12.9
DNMT3A-202ENST00000321117 IVDP26440 423 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 TCF7P36402 384 aaPredicted RBP13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 UBAP2LQ14157 1087 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 ARL13BQ3SXY8 428 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 SPDYE2Q495Y8 402 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 JADE1Q6IE81 842 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 KLC3Q6P597 504 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 IYDQ6PHW0 289 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 ZNF483Q8TF39 744 aaPredicted RBP13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 C20orf96Q9NUD7 363 aaPredicted RBP13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 A0A1B0GUL6 1792 aa13.17□□□□□ -0.3
DNMT3A-202ENST00000321117 PLA2G6O60733 806 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 TBX10O75333 385 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 C6orf222P0C671 652 aaPredicted RBP13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 BNC2Q6ZN30 1099 aaPredicted RBP13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 MARK2Q7KZI7 788 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 CATSPER4Q7RTX7 472 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 DHDDSQ86SQ9 333 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 PDZD8Q8NEN9 1154 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms