RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 H0Y626 953 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 TRIM16O95361 564 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 CALCAP01258 141 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 HOXD12P35452 270 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 SPIDRQ14159 915 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 CGB2Q6NT52 195 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 GABPB2Q8TAK5 448 aaPredicted RBP17.17■□□□□ 0.34
PACS1-201ENST00000320580 FAM136AQ96C01 138 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 IKZF4Q9H2S9 585 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 ACSS3Q9H6R3 686 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 MRGBPQ9NV56 204 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 STK32BQ9NY57 414 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 RAB26Q9ULW5 256 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 V9GYQ6 96 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 ARHGEF9O43307 516 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 TFDP3Q5H9I0 405 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 SPDYAQ5MJ70 313 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 WNK4Q96J92 1243 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 C1orf50Q9BV19 199 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 TCF7L2Q9NQB0 619 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 TBCCD1Q9NVR7 557 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 TGDSO95455 350 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 CRTAMO95727 393 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 MUTP22033 750 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 ATP13A4Q4VNC1 1196 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 N4BP2L1Q5TBK1 243 aaPredicted RBP17.16■□□□□ 0.34
PACS1-201ENST00000320580 OR6B2Q6IFH4 312 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 MCOLN2Q8IZK6 566 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 MYO1HQ8N1T3 1032 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 FAM47BQ8NA70 645 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 MAN1C1Q9NR34 630 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 CACNA1FO60840 1977 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 MYH13Q9UKX3 1938 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 DENND3A2RUS2 1198 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 FBP2O00757 339 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 TCEA3O75764 348 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 MAP3K6O95382 1288 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 COX4I1P13073 169 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 PORP16435 677 aaPredicted RBP17.16■□□□□ 0.34
PACS1-201ENST00000320580 ZNF12P17014 697 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 GTF2IP78347 998 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 MAPRE2Q15555 327 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 CARTPTQ16568 116 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 INTS5Q6P9B9 1019 aaKnown RBP17.16■□□□□ 0.34
PACS1-201ENST00000320580 PLD3Q8IV08 490 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 PNPLA3Q9NST1 481 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 CDYLQ9Y232 598 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 POMPQ9Y244 141 aa17.16■□□□□ 0.34
PACS1-201ENST00000320580 TMEM62Q0P6H9 643 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 CLEC4FQ8N1N0 589 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 LRRC15Q8TF66 581 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 OMA1Q96E52 524 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 MTG1Q9BT17 334 aaPredicted RBP17.15■□□□□ 0.34
PACS1-201ENST00000320580 CLK4Q9HAZ1 481 aaKnown RBP17.15■□□□□ 0.34
PACS1-201ENST00000320580 SAE1Q9UBE0 346 aaPredicted RBP17.15■□□□□ 0.34
PACS1-201ENST00000320580 CAB39Q9Y376 341 aaPredicted RBP17.15■□□□□ 0.34
PACS1-201ENST00000320580 GLRA3O75311 464 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 LYPLA1O75608 230 aaPredicted RBP17.15■□□□□ 0.34
PACS1-201ENST00000320580 ALBP02768 609 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 SERPINB2P05120 415 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 TMEM191BP0C7N4 346 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 YWHAEP62258 255 aaKnown RBP17.15■□□□□ 0.34
PACS1-201ENST00000320580 CLEC16AQ2KHT3 1053 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 PGBD4Q96DM1 585 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 ZC3H12CQ9C0D7 883 aaKnown RBP17.15■□□□□ 0.34
PACS1-201ENST00000320580 DHX35Q9H5Z1 703 aaKnown RBP17.15■□□□□ 0.34
PACS1-201ENST00000320580 JMJD4Q9H9V9 463 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 GGA1Q9UJY5 639 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 PSMD12O00232 456 aaPredicted RBP17.15■□□□□ 0.34
PACS1-201ENST00000320580 DDHD2O94830 711 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 HMGB2P26583 209 aaKnown RBP17.15■□□□□ 0.34
PACS1-201ENST00000320580 FOXR2Q6PJQ5 311 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 POTEHQ6S545 545 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 TREML1Q86YW5 311 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 ZFP28Q8NHY6 868 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 ILKAPQ9H0C8 392 aaPredicted RBP17.15■□□□□ 0.34
PACS1-201ENST00000320580 HMG20AQ9NP66 347 aa17.15■□□□□ 0.34
PACS1-201ENST00000320580 MAGEB2O15479 319 aa17.14■□□□□ 0.34
PACS1-201ENST00000320580 PHGDHO43175 533 aaKnown RBP17.14■□□□□ 0.34
PACS1-201ENST00000320580 ATP5BP06576 529 aaKnown RBP17.14■□□□□ 0.34
PACS1-201ENST00000320580 FOXB2Q5VYV0 432 aa17.14■□□□□ 0.34
PACS1-201ENST00000320580 ADCY4Q8NFM4 1077 aa17.14■□□□□ 0.34
PACS1-201ENST00000320580 NARFQ9UHQ1 456 aa17.14■□□□□ 0.34
PACS1-201ENST00000320580 CARD8Q9Y2G2 431 aa17.14■□□□□ 0.34
PACS1-201ENST00000320580 ARIH1Q9Y4X5 557 aaPredicted RBP17.14■□□□□ 0.34
PACS1-201ENST00000320580 ASTN1O14525 1302 aa17.14■□□□□ 0.33
PACS1-201ENST00000320580 PRR11Q96HE9 360 aaPredicted RBP17.14■□□□□ 0.33
PACS1-201ENST00000320580 SERPINE1P05121 402 aa17.14■□□□□ 0.33
PACS1-201ENST00000320580 GRK2P25098 689 aa17.14■□□□□ 0.33
PACS1-201ENST00000320580 ETFBP38117 255 aa17.14■□□□□ 0.33
PACS1-201ENST00000320580 MYLK3Q32MK0 819 aa17.14■□□□□ 0.33
PACS1-201ENST00000320580 LDLRAP1Q5SW96 308 aa17.14■□□□□ 0.33
PACS1-201ENST00000320580 CELF1Q92879 486 aaKnown RBP17.14■□□□□ 0.33
PACS1-201ENST00000320580 ANKRD36BP1Q96IX9 119 aa17.14■□□□□ 0.33
PACS1-201ENST00000320580 TUBGCP4Q9UGJ1 667 aa17.14■□□□□ 0.33
PACS1-201ENST00000320580 TESPA1A2RU30 521 aaPredicted RBP17.14■□□□□ 0.33
PACS1-201ENST00000320580 BIRC5O15392 142 aa17.14■□□□□ 0.33
PACS1-201ENST00000320580 SIN3BO75182 1162 aa17.14■□□□□ 0.33
PACS1-201ENST00000320580 STT3AP46977 705 aa17.14■□□□□ 0.33
PACS1-201ENST00000320580 IREB2P48200 963 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms