RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CUL4BQ13620 913 aa15.05■□□□□ -0
RPP40-201ENST00000319533 LYSMD4Q5XG99 296 aa15.05■□□□□ -0
RPP40-201ENST00000319533 ZNF513Q8N8E2 541 aaPredicted RBP15.05■□□□□ -0
RPP40-201ENST00000319533 HMGB4Q8WW32 186 aa15.05■□□□□ -0
RPP40-201ENST00000319533 MED10Q9BTT4 135 aa15.05■□□□□ -0
RPP40-201ENST00000319533 KLF16Q9BXK1 252 aaPredicted RBP15.05■□□□□ -0
RPP40-201ENST00000319533 NUSAP1Q9BXS6 441 aaKnown RBP15.05■□□□□ -0
RPP40-201ENST00000319533 ZDHHC4Q9NPG8 344 aa15.05■□□□□ -0
RPP40-201ENST00000319533 MARK1Q9P0L2 795 aa15.05■□□□□ -0
RPP40-201ENST00000319533 BCCIPQ9P287 314 aaKnown RBP eCLIP15.05■□□□□ -0
RPP40-201ENST00000319533 RCOR1Q9UKL0 485 aa15.05■□□□□ -0
RPP40-201ENST00000319533 PCDHA7Q9UN72 937 aa15.05■□□□□ -0
RPP40-201ENST00000319533 PI4KAP42356 2102 aa15.05■□□□□ -0
RPP40-201ENST00000319533 ZZEF1O43149 2961 aa15.04■□□□□ -0
RPP40-201ENST00000319533 FAM208BQ5VWN6 2430 aa15.04■□□□□ -0
RPP40-201ENST00000319533 PCNX2A6NKB5 2137 aa15.04■□□□□ -0
RPP40-201ENST00000319533 A0A1W2PQF6 199 aa15.04■□□□□ -0
RPP40-201ENST00000319533 KLRC4O43908 158 aa15.04■□□□□ -0
RPP40-201ENST00000319533 TLR5O60602 858 aa15.04■□□□□ -0
RPP40-201ENST00000319533 BEST1O76090 585 aa15.04■□□□□ -0
RPP40-201ENST00000319533 RPN1P04843 607 aaKnown RBP15.04■□□□□ -0
RPP40-201ENST00000319533 ENGP17813 658 aa15.04■□□□□ -0
RPP40-201ENST00000319533 GABRG2P18507 467 aa15.04■□□□□ -0
RPP40-201ENST00000319533 FOXC1Q12948 553 aa15.04■□□□□ -0
RPP40-201ENST00000319533 SGSM1Q2NKQ1 1148 aa15.04■□□□□ -0
RPP40-201ENST00000319533 ZACNQ401N2 412 aa15.04■□□□□ -0
RPP40-201ENST00000319533 RESP18Q5W5W9 173 aa15.04■□□□□ -0
RPP40-201ENST00000319533 SLC36A4Q6YBV0 504 aa15.04■□□□□ -0
RPP40-201ENST00000319533 NUDT18Q6ZVK8 323 aa15.04■□□□□ -0
RPP40-201ENST00000319533 PIP4P1Q86T03 277 aa15.04■□□□□ -0
RPP40-201ENST00000319533 ACOT1Q86TX2 421 aa15.04■□□□□ -0
RPP40-201ENST00000319533 UNC93AQ86WB7 457 aa15.04■□□□□ -0
RPP40-201ENST00000319533 MIB1Q86YT6 1006 aa15.04■□□□□ -0
RPP40-201ENST00000319533 NAT16Q8N8M0 369 aa15.04■□□□□ -0
RPP40-201ENST00000319533 TAF4BQ92750 862 aa15.04■□□□□ -0
RPP40-201ENST00000319533 ADAM33Q9BZ11 813 aa15.04■□□□□ -0
RPP40-201ENST00000319533 FBXO44Q9H4M3 255 aa15.04■□□□□ -0
RPP40-201ENST00000319533 CYLDQ9NQC7 956 aa15.04■□□□□ -0
RPP40-201ENST00000319533 KRT82Q9NSB4 513 aa15.04■□□□□ -0
RPP40-201ENST00000319533 TMEM8BA6NDV4 472 aa15.03■□□□□ -0
RPP40-201ENST00000319533 TRIM24O15164 1050 aa15.03■□□□□ -0
RPP40-201ENST00000319533 AP5Z1O43299 807 aa15.03■□□□□ -0
RPP40-201ENST00000319533 CACNG3O60359 315 aa15.03■□□□□ -0
RPP40-201ENST00000319533 P4HA1P13674 534 aa15.03■□□□□ -0
RPP40-201ENST00000319533 ITPKAP23677 461 aa15.03■□□□□ -0
RPP40-201ENST00000319533 NTSR1P30989 418 aa15.03■□□□□ -0
RPP40-201ENST00000319533 STK4Q13043 487 aa15.03■□□□□ -0
RPP40-201ENST00000319533 SEMA3BQ13214 749 aa15.03■□□□□ -0
RPP40-201ENST00000319533 UAP1L1Q3KQV9 507 aa15.03■□□□□ -0
RPP40-201ENST00000319533 C10orf76Q5T2E6 689 aa15.03■□□□□ -0
RPP40-201ENST00000319533 KLHDC10Q6PID8 442 aa15.03■□□□□ -0
RPP40-201ENST00000319533 SCARA5Q6ZMJ2 495 aa15.03■□□□□ -0
RPP40-201ENST00000319533 ARMCX6Q7L4S7 300 aa15.03■□□□□ -0
RPP40-201ENST00000319533 KIAA0895Q8NCT3 520 aa15.03■□□□□ -0
RPP40-201ENST00000319533 DEFB124Q8NES8 71 aa15.03■□□□□ -0
RPP40-201ENST00000319533 CEP76Q8TAP6 659 aa15.03■□□□□ -0
RPP40-201ENST00000319533 SLC2A14Q8TDB8 520 aa15.03■□□□□ -0
RPP40-201ENST00000319533 TMC2Q8TDI7 906 aa15.03■□□□□ -0
RPP40-201ENST00000319533 SPOCK2Q92563 424 aa15.03■□□□□ -0
RPP40-201ENST00000319533 GATA6Q92908 595 aa15.03■□□□□ -0
RPP40-201ENST00000319533 SPATA32Q96LK8 384 aa15.03■□□□□ -0
RPP40-201ENST00000319533 KCTD10Q9H3F6 313 aa15.03■□□□□ -0
RPP40-201ENST00000319533 CAPN10Q9HC96 672 aa15.03■□□□□ -0
RPP40-201ENST00000319533 TLR8Q9NR97 1041 aaKnown RBP15.03■□□□□ -0
RPP40-201ENST00000319533 SLC6A14Q9UN76 642 aa15.03■□□□□ -0
RPP40-201ENST00000319533 SCML2Q9UQR0 700 aa15.03■□□□□ -0
RPP40-201ENST00000319533 ZDHHC9Q9Y397 364 aa15.03■□□□□ -0
RPP40-201ENST00000319533 CACNA1EQ15878 2313 aa15.02■□□□□ -0
RPP40-201ENST00000319533 HHLA1C9JL84 531 aa15.02■□□□□ -0
RPP40-201ENST00000319533 IKBKBO14920 756 aa15.02■□□□□ -0
RPP40-201ENST00000319533 TBX18O95935 607 aa15.02■□□□□ -0
RPP40-201ENST00000319533 TOP3BO95985 862 aaKnown RBP15.02■□□□□ -0
RPP40-201ENST00000319533 ASS1P00966 412 aaKnown RBP15.02■□□□□ -0
RPP40-201ENST00000319533 SERPINF2P08697 491 aa15.02■□□□□ -0
RPP40-201ENST00000319533 CCDC130P13994 396 aa15.02■□□□□ -0
RPP40-201ENST00000319533 HOXB2P14652 356 aa15.02■□□□□ -0
RPP40-201ENST00000319533 ASPAP45381 313 aa15.02■□□□□ -0
RPP40-201ENST00000319533 NDST1P52848 882 aa15.02■□□□□ -0
RPP40-201ENST00000319533 MAP3K7CLP57077 242 aa15.02■□□□□ -0
RPP40-201ENST00000319533 DLG4P78352 724 aa15.02■□□□□ -0
RPP40-201ENST00000319533 DUOXA1Q1HG43 343 aa15.02■□□□□ -0
RPP40-201ENST00000319533 ANO4Q32M45 955 aa15.02■□□□□ -0
RPP40-201ENST00000319533 EGFLAMQ63HQ2 1017 aa15.02■□□□□ -0
RPP40-201ENST00000319533 GRAMD4Q6IC98 578 aa15.02■□□□□ -0
RPP40-201ENST00000319533 SV2AQ7L0J3 742 aa15.02■□□□□ -0
RPP40-201ENST00000319533 PGBD3Q8N328 593 aa15.02■□□□□ -0
RPP40-201ENST00000319533 ELMO3Q96BJ8 720 aa15.02■□□□□ -0
RPP40-201ENST00000319533 GABRG3Q99928 467 aa15.02■□□□□ -0
RPP40-201ENST00000319533 SCNM1Q9BWG6 230 aa15.02■□□□□ -0
RPP40-201ENST00000319533 SLC32A1Q9H598 525 aa15.02■□□□□ -0
RPP40-201ENST00000319533 PNPLA8Q9NP80 782 aa15.02■□□□□ -0
RPP40-201ENST00000319533 CALCOCO1Q9P1Z2 691 aa15.02■□□□□ -0
RPP40-201ENST00000319533 WDR35Q9P2L0 1181 aa15.02■□□□□ -0
RPP40-201ENST00000319533 HMGXB4Q9UGU5 601 aa15.02■□□□□ -0
RPP40-201ENST00000319533 ZMIZ1Q9ULJ6 1067 aa15.02■□□□□ -0
RPP40-201ENST00000319533 CIZ1Q9ULV3 898 aaPredicted RBP15.02■□□□□ -0
RPP40-201ENST00000319533 PCDH15Q96QU1 1955 aa15.02□□□□□ -0.01
RPP40-201ENST00000319533 AKAP13Q12802 2813 aa15.02□□□□□ -0.01
RPP40-201ENST00000319533 WDFY3Q8IZQ1 3526 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 IGHV1OR15-9A0A0B4J2B8 117 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms