RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 C15orf41Q9Y2V0 281 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 USP15Q9Y4E8 981 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-202ENST00000315962 CHD7Q9P2D1 2997 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 MYBPHLA2RUH7 354 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 POC1B-GALNT4F8VUJ3 575 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 MAP3K13O43283 966 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 ADAMTS4O75173 837 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 CBX6O95503 412 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 FOXN2P32314 431 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 CDKN2BP42772 138 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 ATN1P54259 1190 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-202ENST00000315962 GJA9P57773 515 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 OTUD4Q01804 1114 aaKnown RBP7.93□□□□□ -1.14
TRIM55-202ENST00000315962 SLC25A11Q02978 314 aaKnown RBP7.93□□□□□ -1.14
TRIM55-202ENST00000315962 ADIGQ0VDE8 80 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 GPS1Q13098 491 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 PIGHQ14442 188 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-202ENST00000315962 FASTKD3Q14CZ7 662 aaKnown RBP7.93□□□□□ -1.14
TRIM55-202ENST00000315962 CCDC14Q49A88 953 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 TFDP3Q5H9I0 405 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 FAXCQ5TGI0 409 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 LCLAT1Q6UWP7 414 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 RFX8Q6ZV50 586 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 BZW1Q7L1Q6 419 aaKnown RBP7.93□□□□□ -1.14
TRIM55-202ENST00000315962 FAM131BQ86XD5 332 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 KATNAL2Q8IYT4 538 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 FAM172AQ8WUF8 416 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 LHX5Q9H2C1 402 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 LRRC19Q9H756 370 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 DDX43Q9NXZ2 648 aaKnown RBP7.93□□□□□ -1.14
TRIM55-202ENST00000315962 HCSTQ9UBK5 93 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 HAO1Q9UJM8 370 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 GGA2Q9UJY4 613 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 NUDT5Q9UKK9 219 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 MFHAS1Q9Y4C4 1052 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 PIRO00625 290 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 PSTPIP1O43586 416 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 AGTP01019 485 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 OR4Q2P0C623 313 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 TAF6P49848 677 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 INCA1Q0VD86 236 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 DHX34Q14147 1143 aaKnown RBP7.93□□□□□ -1.14
TRIM55-202ENST00000315962 DCAF6Q58WW2 860 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 C6orf118Q5T5N4 469 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 SPATA21Q7Z572 469 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 SMC1BQ8NDV3 1235 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 EXD1Q8NHP7 514 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 SLC35F5Q8WV83 523 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 ERP27Q96DN0 273 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 TMEM209Q96SK2 561 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 KLF6Q99612 283 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-202ENST00000315962 CEP41Q9BYV8 373 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 ZNF518BQ9C0D4 1074 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 PLEKHA5Q9HAU0 1116 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 CYP3A43Q9HB55 503 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 PIH1D1Q9NWS0 290 aaKnown RBP7.93□□□□□ -1.14
TRIM55-202ENST00000315962 STRIP2Q9ULQ0 834 aa7.93□□□□□ -1.14
TRIM55-202ENST00000315962 TJP3O95049 919 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 THP07101 528 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 ATF2P15336 505 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 TAF2Q6P1X5 1199 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 DSTYKQ6XUX3 929 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 HFE2Q6ZVN8 426 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 PIGZQ86VD9 579 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 SERINC5Q86VE9 423 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 ECHDC2Q86YB7 292 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 RCOR2Q8IZ40 523 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 B3GALNT2Q8NCR0 500 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 ATL2Q8NHH9 583 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.92□□□□□ -1.14
TRIM55-202ENST00000315962 EDEM1Q92611 657 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 SENP8Q96LD8 212 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 ANAPC5Q9UJX4 755 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 ATP8B3O60423 1300 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 hCG_1818297A0A087WSY0 165 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 FAM187AA6NFU0 413 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 C3orf70A6NLC5 250 aaPredicted RBP7.92□□□□□ -1.14
TRIM55-202ENST00000315962 GOLGA8RI6L899 631 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 PODXLO00592 558 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 LIASO43766 372 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 PRPSAP2O60256 369 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 B4GALT3O60512 393 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 GAS8O95995 478 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 KDELR1P24390 212 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 IVDP26440 423 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 CDH5P33151 784 aaPredicted RBP7.92□□□□□ -1.14
TRIM55-202ENST00000315962 MSH2P43246 934 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 COPS2P61201 443 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 OVGP1Q12889 678 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 TIGD5Q53EQ6 642 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 SYPL2Q5VXT5 272 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 IZUMO3Q5VZ72 239 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 OLFML1Q6UWY5 402 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 GPRIN1Q7Z2K8 1008 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 ANKMY2Q8IV38 441 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 UNC45BQ8IWX7 931 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 TTC8Q8TAM2 541 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 SPATA18Q8TC71 538 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 GPR152Q8TDT2 470 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 SENP6Q9GZR1 1112 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms