RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 ACAD9Q9H845 621 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 PAPOLBQ9NRJ5 636 aaKnown RBP17.23■□□□□ 0.35
SSH3-201ENST00000308127 SIX4Q9UIU6 781 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 MAGED2Q9UNF1 606 aaPredicted RBP17.23■□□□□ 0.35
SSH3-201ENST00000308127 GJA3Q9Y6H8 435 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 ARHGAP42A6NI28 874 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 OGTO15294 1046 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 ITM2AO43736 263 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 RFPL1O75677 317 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 C6orf222P0C671 652 aaPredicted RBP17.23■□□□□ 0.35
SSH3-201ENST00000308127 SKIP12755 728 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 CLCN3P51790 818 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 SLC18A2Q05940 514 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 RALGPS1Q5JS13 557 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 OR52E8Q6IFG1 317 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 PPFIBP2Q8ND30 876 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 PHACTR1Q9C0D0 580 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 MAP3K20Q9NYL2 800 aaKnown RBP17.23■□□□□ 0.35
SSH3-201ENST00000308127 SLC7A8Q9UHI5 535 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 LRCH1Q9Y2L9 728 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 MFHAS1Q9Y4C4 1052 aa17.23■□□□□ 0.35
SSH3-201ENST00000308127 MAFGO15525 162 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 ZBED1O96006 694 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 LMNAP02545 664 aaKnown RBP17.22■□□□□ 0.35
SSH3-201ENST00000308127 STXBP2Q15833 593 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 ZNF667Q5HYK9 610 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 VWA5B1Q5TIE3 1220 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 TTC39BQ5VTQ0 682 aaPredicted RBP17.22■□□□□ 0.35
SSH3-201ENST00000308127 MAP1SQ66K74 1059 aaPredicted RBP17.22■□□□□ 0.35
SSH3-201ENST00000308127 CASC4Q6P4E1 433 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 SLC30A9Q6PML9 568 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 PPP1R14CQ8TAE6 165 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 AGR3Q8TD06 166 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 POPDC2Q9HBU9 364 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 SCOCQ9UIL1 159 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 HACL1Q9UJ83 578 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 CPSF3Q9UKF6 684 aaKnown RBP17.22■□□□□ 0.35
SSH3-201ENST00000308127 PLLPQ9Y342 182 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 COL11A1P12107 1806 aaPredicted RBP17.22■□□□□ 0.35
SSH3-201ENST00000308127 A0A1B0GVG6 124 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 METTL18O95568 372 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 TNNC2P02585 160 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 NOMO1Q15155 1222 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 UNC5AQ6ZN44 842 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 SCUBE1Q8IWY4 988 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 ULK2Q8IYT8 1036 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 CMASQ8NFW8 434 aaPredicted RBP17.22■□□□□ 0.35
SSH3-201ENST00000308127 ATXN7L3BQ96GX2 97 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 USP29Q9HBJ7 922 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 PCDHGC3Q9UN70 934 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 HMX2A2RU54 273 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 C1QAP02745 245 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 SNRPAP09012 282 aaKnown RBP17.22■□□□□ 0.35
SSH3-201ENST00000308127 TAP1Q03518 808 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 PTPN11Q06124 597 aaPredicted RBP17.22■□□□□ 0.35
SSH3-201ENST00000308127 FKBP1CQ5VVH2 108 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 CES3Q6UWW8 571 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 DENND5BQ6ZUT9 1274 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 FAM183BPQ6ZVS7 135 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 CYP4V2Q6ZWL3 525 aaPredicted RBP17.22■□□□□ 0.35
SSH3-201ENST00000308127 CHSY1Q86X52 802 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 C1orf127Q8N9H9 656 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 ZNF280CQ8ND82 737 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 MOCOSQ96EN8 888 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 TEX13BQ9BXU2 312 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 B3GNT5Q9BYG0 378 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 MIS12Q9H081 205 aa17.22■□□□□ 0.35
SSH3-201ENST00000308127 STX18Q9P2W9 335 aaKnown RBP17.22■□□□□ 0.35
SSH3-201ENST00000308127 BRWD3Q6RI45 1802 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 LOC100653049A0A140TA62 436 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 KRT34O76011 436 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 IQCF3P0C7M6 154 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 CYP3A5P20815 502 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 OSBPP22059 807 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 INHBEP58166 350 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 MAP3K10Q02779 954 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 AEBP2Q6ZN18 517 aaPredicted RBP17.21■□□□□ 0.35
SSH3-201ENST00000308127 PLD5Q8N7P1 536 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 ANKRD36BP1Q96IX9 119 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 ZNF518BQ9C0D4 1074 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 FER1L6Q2WGJ9 1857 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 PRPSAP2O60256 369 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 KRT37O76014 449 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 ETS2P15036 469 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 PAPOLAP51003 745 aaKnown RBP17.21■□□□□ 0.35
SSH3-201ENST00000308127 BCAR1P56945 870 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 HSDL1Q3SXM5 330 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 IRGCQ6NXR0 463 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 ATG14Q6ZNE5 492 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 RAPH1Q70E73 1250 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 CDHR1Q96JP9 859 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 ZNF184Q99676 751 aaPredicted RBP17.21■□□□□ 0.35
SSH3-201ENST00000308127 PPCSQ9HAB8 311 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 FAM49BQ9NUQ9 324 aa17.21■□□□□ 0.35
SSH3-201ENST00000308127 HCRTO43612 131 aa17.2■□□□□ 0.34
SSH3-201ENST00000308127 DNAJC6O75061 913 aa17.2■□□□□ 0.34
SSH3-201ENST00000308127 STK10O94804 968 aaKnown RBP17.2■□□□□ 0.34
SSH3-201ENST00000308127 ANPEPP15144 967 aa17.2■□□□□ 0.34
SSH3-201ENST00000308127 PTPRAP18433 802 aa17.2■□□□□ 0.34
SSH3-201ENST00000308127 CDH5P33151 784 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms