RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 DISP2A7MBM2 1401 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 HNRNPRO43390 633 aaKnown RBP16.44■□□□□ 0.22
USP42-201ENST00000306177 KDM1AO60341 852 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 ELAVL2Q12926 359 aaKnown RBP16.44■□□□□ 0.22
USP42-201ENST00000306177 ZNF410Q86VK4 478 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 NR1H4Q96RI1 486 aaPredicted RBP16.44■□□□□ 0.22
USP42-201ENST00000306177 UBXN6Q9BZV1 441 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 ANKZF1Q9H8Y5 726 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 SLC40A1Q9NP59 571 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 RRN3Q9NYV6 651 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.44■□□□□ 0.22
USP42-201ENST00000306177 TARSP26639 723 aaKnown RBP16.44■□□□□ 0.22
USP42-201ENST00000306177 KPNA1P52294 538 aaPredicted RBP16.44■□□□□ 0.22
USP42-201ENST00000306177 DNAJB3Q8WWF6 145 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 MTG1Q9BT17 334 aaPredicted RBP16.44■□□□□ 0.22
USP42-201ENST00000306177 FICDQ9BVA6 458 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 ABHD16BQ9H3Z7 469 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 PDGFCQ9NRA1 345 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 CHST12Q9NRB3 414 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 URODP06132 367 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 CKMP06732 381 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 PAEPP09466 180 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 AXLP30530 894 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 STRA8Q7Z7C7 330 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 APBB2Q92870 758 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 STARD7Q9NQZ5 370 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 TRIM66O15016 1216 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 ADORA2AP29274 412 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 NUDT2P50583 147 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 WASHC5Q12768 1159 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 NFIL3Q16649 462 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 COLGALT1Q8NBJ5 622 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 SELENONQ9NZV5 590 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.44■□□□□ 0.22
USP42-201ENST00000306177 ITM2BQ9Y287 266 aa16.44■□□□□ 0.22
USP42-201ENST00000306177 DDX3XO00571 662 aaKnown RBP eCLIP16.43■□□□□ 0.229e-7■■■□□ 18.6
USP42-201ENST00000306177 SKOR1P84550 965 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 TRAPPC12Q8WVT3 735 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 CYGBQ8WWM9 190 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 AVENQ9NQS1 362 aaPredicted RBP16.43■□□□□ 0.22
USP42-201ENST00000306177 PCDHA3Q9Y5H8 950 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 SKAP2O75563 359 aaPredicted RBP16.43■□□□□ 0.22
USP42-201ENST00000306177 TRIM16O95361 564 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 CRTAMO95727 393 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 CSE1LP55060 971 aaKnown RBP16.43■□□□□ 0.22
USP42-201ENST00000306177 LRRC8BQ6P9F7 803 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 CARNMT1Q8N4J0 409 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 KCNMB3Q9NPA1 279 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 KANSL3Q9P2N6 904 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 PCDHAC2Q9Y5I4 1007 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 TM9SF1O15321 606 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 RHOCP08134 193 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 MEA1Q16626 185 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 TAF2Q6P1X5 1199 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 TUBGCP3Q96CW5 907 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 APOL2Q9BQE5 337 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 EIF3LQ9Y262 564 aaKnown RBP16.43■□□□□ 0.22
USP42-201ENST00000306177 MYO5BQ9ULV0 1848 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 MICAL2O94851 1124 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 HOXC6P09630 235 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 SOX11P35716 441 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 SERPINB10P48595 397 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 DAB2P98082 770 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 OVOS1Q6IE37 1185 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 SHCBP1LQ9BZQ2 653 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 UBR1Q8IWV7 1749 aa16.43■□□□□ 0.22
USP42-201ENST00000306177 CCR1P32246 355 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 KCNMA1Q12791 1236 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 VGLL4Q14135 290 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 GALNT4Q8N4A0 578 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 OTULINQ96BN8 352 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 BATF3Q9NR55 127 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 TBC1D13Q9NVG8 400 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 ARIH2O95376 493 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 THRAP10827 490 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 MZF1P28698 734 aaPredicted RBP16.42■□□□□ 0.22
USP42-201ENST00000306177 CORO7P57737 925 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 MFSD10Q14728 455 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 CDCA5Q96FF9 252 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 SLC25A13Q9UJS0 675 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 DOLKQ9UPQ8 538 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 USP20Q9Y2K6 914 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 CNTNAP2Q9UHC6 1331 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 FAM237AA0A1B0GTK4 181 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 LACTBL1A8MY62 500 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 O00370 1275 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 HLA-DPA1P20036 260 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 KCNA3P22001 575 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 AKAP5P24588 427 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 MGAT5Q09328 741 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 MPP3Q13368 585 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 CACHD1Q5VU97 1274 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 TEX9Q8N6V9 391 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 ZNF333Q96JL9 665 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 VPS28Q9UK41 221 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 ACOT9Q9Y305 439 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 MAGEB16A2A368 324 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 MEIS2O14770 477 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 ALDH2P05091 517 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 RBP1P09455 135 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms