RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 EDNRBP24530 442 aa9.6□□□□□ -0.87
PTPRE-202ENST00000306042 GEMP55040 296 aa9.6□□□□□ -0.87
PTPRE-202ENST00000306042 RAD9BQ6WBX8 426 aa9.6□□□□□ -0.87
PTPRE-202ENST00000306042 MYRIPQ8NFW9 859 aa9.6□□□□□ -0.87
PTPRE-202ENST00000306042 PIK3R5Q8WYR1 880 aa9.6□□□□□ -0.87
PTPRE-202ENST00000306042 KAT5Q92993 513 aa9.6□□□□□ -0.87
PTPRE-202ENST00000306042 MRPL45Q9BRJ2 306 aaKnown RBP9.6□□□□□ -0.87
PTPRE-202ENST00000306042 TKTL2Q9H0I9 626 aa9.6□□□□□ -0.87
PTPRE-202ENST00000306042 KCTD10Q9H3F6 313 aa9.6□□□□□ -0.87
PTPRE-202ENST00000306042 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTPRE-202ENST00000306042 CRLS1Q9UJA2 301 aa9.6□□□□□ -0.87
PTPRE-202ENST00000306042 VANGL2Q9ULK5 521 aa9.6□□□□□ -0.87
PTPRE-202ENST00000306042 ADAMTS5Q9UNA0 930 aa9.6□□□□□ -0.87
PTPRE-202ENST00000306042 PROSCO94903 275 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 ATP1A1P05023 1023 aaKnown RBP9.59□□□□□ -0.87
PTPRE-202ENST00000306042 PTPN2P17706 415 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 SCNN1BP51168 640 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 RENBPP51606 427 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 HIF1AQ16665 826 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 HP1BP3Q5SSJ5 553 aaPredicted RBP9.59□□□□□ -0.87
PTPRE-202ENST00000306042 C4orf22Q6V702 233 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 CCDC121Q6ZUS5 278 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 CEP68Q76N32 757 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 RAD9AQ99638 391 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 NFU1Q9UMS0 254 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 TOGARAM1Q9Y4F4 1720 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 MYH13Q9UKX3 1938 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 NRP1O14786 923 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 HGSO14964 777 aaPredicted RBP9.59□□□□□ -0.87
PTPRE-202ENST00000306042 MAP3K6O95382 1288 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 C8AP07357 584 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 PBX3P40426 434 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 SGCGQ13326 291 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 NFIL3Q16649 462 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 ZNF284Q2VY69 593 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 KLHL38Q2WGJ6 581 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 LRRC55Q6ZSA7 311 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 SERINC5Q86VE9 423 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 MON1AQ86VX9 555 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 TRIM42Q8IWZ5 723 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 GPATCH11Q8N954 259 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 LRRC8CQ8TDW0 803 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 WNT8BQ93098 351 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 ULK4Q96C45 1275 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 FAM118BQ9BPY3 351 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 VPS11Q9H270 941 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 KIAA0100Q14667 2235 aaKnown RBP9.59□□□□□ -0.87
PTPRE-202ENST00000306042 C2orf81A6NN90 581 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 ADH1CP00326 375 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 RPL17P18621 184 aaKnown RBP9.59□□□□□ -0.87
PTPRE-202ENST00000306042 MAP4P27816 1152 aaKnown RBP9.59□□□□□ -0.87
PTPRE-202ENST00000306042 LILRA4P59901 499 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 SYDE1Q6ZW31 735 aaPredicted RBP9.59□□□□□ -0.87
PTPRE-202ENST00000306042 LINC00523Q86TU6 105 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 DENND1CQ8IV53 801 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 TRIM48Q8IWZ4 208 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 C2orf49Q9BVC5 232 aaPredicted RBP9.59□□□□□ -0.87
PTPRE-202ENST00000306042 BBS2Q9BXC9 721 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 GOLPH3Q9H4A6 298 aa9.59□□□□□ -0.87
PTPRE-202ENST00000306042 KPNA3O00505 521 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 ZRANB3Q5FWF4 1079 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 TFDP3Q5H9I0 405 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 MARC1Q5VT66 337 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 TTC19Q6DKK2 380 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 ERAP2Q6P179 960 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 DENND1BQ6P3S1 775 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 PRSS55Q6UWB4 352 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 RGL4Q8IZJ4 473 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 LZTR1Q8N653 840 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 C12orf29Q8N999 325 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 BLOC1S5Q8TDH9 187 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 NTPCRQ9BSD7 190 aaKnown RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 C16orf70Q9BSU1 422 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 DUSP16Q9BY84 665 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 SNX12Q9UMY4 172 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 FIS1Q9Y3D6 152 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 ALDH1A2O94788 518 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 ZC3H12AQ5D1E8 599 aaKnown RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 INTS6LQ5JSJ4 861 aaKnown RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 ARMC6Q6NXE6 501 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 SERPINA13PQ6UXR4 307 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 HS6ST3Q8IZP7 471 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 TPCN2Q8NHX9 752 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 CDC26Q8NHZ8 85 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 EMID1Q96A84 441 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 NT5MQ9NPB1 228 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 LATS2Q9NRM7 1088 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 AIPL1Q9NZN9 384 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 AMACRQ9UHK6 382 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 MYADML2A6NDP7 307 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 ZNF263O14978 683 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 TBC1D4O60343 1298 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 HIST1H2AGP0C0S8 130 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 TYMPP19971 482 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 HIST1H2ADP20671 130 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 STIP1P31948 543 aaKnown RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 CCT5P48643 541 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 TAF10Q12962 218 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms