RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ARPP19P56211 112 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 NSUN2Q08J23 767 aaKnown RBP eCLIP13.73□□□□□ -0.21
DDX54-201ENST00000306014 TBL3Q12788 808 aaKnown RBP13.73□□□□□ -0.21
DDX54-201ENST00000306014 SAMD3Q8N6K7 520 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 CHST13Q8NET6 341 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 LRRN4Q8WUT4 740 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 ELMO2Q96JJ3 720 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 MFSD14AQ96MC6 490 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 CCT7Q99832 543 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 ZNF711Q9Y462 761 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 PROCP04070 461 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 RARBP10826 455 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 ATP6V1C1P21283 382 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 UGP2Q16851 508 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 C15orf59Q2T9L4 293 aaPredicted RBP13.73□□□□□ -0.21
DDX54-201ENST00000306014 THEMIS2Q5TEJ8 643 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 CES3Q6UWW8 571 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 ERAP1Q9NZ08 941 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 C2CD2Q9Y426 696 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 HMGCRP04035 888 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 GRK2P25098 689 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 YY1P25490 414 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 AVPR1AP37288 418 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 NBPF12Q5TAG4 269 aaPredicted RBP13.72□□□□□ -0.21
DDX54-201ENST00000306014 VSTM1Q6UX27 236 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 STRA8Q7Z7C7 330 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 CLNKQ7Z7G1 428 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 VSIG10LQ86VR7 867 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 STKLD1Q8NE28 680 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 IPMKQ8NFU5 416 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 RFWD2Q8NHY2 731 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 PBXIP1Q96AQ6 731 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 CAMKK2Q96RR4 588 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 CAAP1Q9H8G2 361 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 SPC25Q9HBM1 224 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.72□□□□□ -0.21
DDX54-201ENST00000306014 ZNF212Q9UDV6 495 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 SLC12A4Q9UP95 1085 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 M0QYT0 321 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 AVILO75366 819 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 MICAL2O94851 1124 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 UPP2O95045 317 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 S100BP04271 92 aaPredicted RBP13.72□□□□□ -0.21
DDX54-201ENST00000306014 GNL1P36915 607 aaPredicted RBP13.72□□□□□ -0.21
DDX54-201ENST00000306014 HSD17B4P51659 736 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 NDST1P52848 882 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 HADHBP55084 474 aaKnown RBP13.72□□□□□ -0.21
DDX54-201ENST00000306014 MMRN1Q13201 1228 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 RNF148Q8N7C7 305 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 PPP2R3CQ969Q6 453 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 CPB2Q96IY4 423 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 DDX50Q9BQ39 737 aaKnown RBP13.72□□□□□ -0.21
DDX54-201ENST00000306014 ARL8BQ9NVJ2 186 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 KCNK4Q9NYG8 393 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 WRAP73Q9P2S5 460 aaPredicted RBP13.72□□□□□ -0.21
DDX54-201ENST00000306014 WDR27A2RRH5 827 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 THRAP10827 490 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 DSG3P32926 999 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 DGKZQ13574 1117 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 C16orf87Q6PH81 154 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 SCUBE3Q8IX30 993 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 C12orf50Q8NA57 414 aaPredicted RBP13.72□□□□□ -0.21
DDX54-201ENST00000306014 TRAPPC12Q8WVT3 735 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 DTNBP1Q96EV8 351 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 MBOAT7Q96N66 472 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 FAM193BQ96PV7 902 aaPredicted RBP13.72□□□□□ -0.21
DDX54-201ENST00000306014 MECRQ9BV79 373 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 IL1RL2Q9HB29 575 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 MROH7Q68CQ1 1323 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 SCN11AQ9UI33 1791 aa13.72□□□□□ -0.21
DDX54-201ENST00000306014 C2orf71A6NGG8 1288 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 DCXO43602 365 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 SUPT3HO75486 399 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 IL10P22301 178 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 ZPBP2Q6X784 338 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 UNC45BQ8IWX7 931 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 COLGALT1Q8NBJ5 622 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 ZNF398Q8TD17 642 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 CORO1CQ9ULV4 474 aaPredicted RBP13.71□□□□□ -0.21
DDX54-201ENST00000306014 PLIN4Q96Q06 1357 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 TCRBV9S1A1TA0A576 114 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 SIGLEC16A6NMB1 481 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 MAGEB2O15479 319 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 TPST1O60507 370 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 FOXN2P32314 431 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 TNFSF9P41273 254 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 SLC25A3Q00325 362 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 BBS12Q6ZW61 710 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 FAM83AQ86UY5 434 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 ALYREFQ86V81 257 aaKnown RBP13.71□□□□□ -0.21
DDX54-201ENST00000306014 PPHLN1Q8NEY8 458 aaKnown RBP13.71□□□□□ -0.21
DDX54-201ENST00000306014 PORCNQ9H237 461 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 ELP3Q9H9T3 547 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 KRT82Q9NSB4 513 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 TMEM191CA6NGB0 347 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 E5RJQ4 531 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 GAS2O43903 313 aaKnown RBP13.71□□□□□ -0.21
DDX54-201ENST00000306014 PGK2P07205 417 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 CNTN2Q02246 1040 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 IL31Q6EBC2 164 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms