RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 RAB21Q9UL25 225 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 SPATA31A6Q5VVP1 1343 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 NR5A2O00482 541 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 PYGMP11217 842 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 NFYCQ13952 458 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 CSHL1Q14406 222 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 PAN2Q504Q3 1202 aaKnown RBP14.36□□□□□ -0.11
PRKCB-201ENST00000303531 TLR10Q9BXR5 811 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 IMPAD1Q9NX62 359 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 A0A087WZ62 844 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 FBXO21O94952 628 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 IMPDH2P12268 514 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 ERVK-9P63128 1117 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 BST2Q10589 180 aaKnown RBP14.36□□□□□ -0.11
PRKCB-201ENST00000303531 PGM5Q15124 567 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 TMEM119Q4V9L6 283 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 GPR141Q7Z602 305 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 BTN2A2Q8WVV5 523 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 USP13Q92995 863 aaPredicted RBP14.36□□□□□ -0.11
PRKCB-201ENST00000303531 FDXACB1Q9BRP7 624 aaPredicted RBP14.36□□□□□ -0.11
PRKCB-201ENST00000303531 SCUBE2Q9NQ36 999 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 SHOC2Q9UQ13 582 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 DRG1Q9Y295 367 aaKnown RBP14.36□□□□□ -0.11
PRKCB-201ENST00000303531 SLIT1O75093 1534 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 MAPTP10636 758 aaKnown RBP14.35□□□□□ -0.11
PRKCB-201ENST00000303531 POLD3Q15054 466 aaPredicted RBP14.35□□□□□ -0.11
PRKCB-201ENST00000303531 GPAMQ9HCL2 828 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 CSDE1O75534 798 aaKnown RBP14.35□□□□□ -0.11
PRKCB-201ENST00000303531 ZSWIM2Q8NEG5 633 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 NCKIPSDQ9NZQ3 722 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 VANGL2Q9ULK5 521 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 DIP2BQ9P265 1576 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 GOLGA8TH3BQL2 631 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 ALDH7A1P49419 539 aaKnown RBP14.35□□□□□ -0.11
PRKCB-201ENST00000303531 CHRNB3Q05901 458 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 CCDC142Q17RM4 750 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 COLEC11Q9BWP8 271 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 IQGAP1P46940 1657 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 MEGF6O75095 1541 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 FAM86B1E9PN63 330 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 F8W810 466 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 FAM86B2P0C5J1 330 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 HUNKP57058 714 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 CSTF3Q12996 717 aaKnown RBP14.35□□□□□ -0.11
PRKCB-201ENST00000303531 CYP51A1Q16850 503 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 DDI1Q8WTU0 396 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 DIP2CQ9Y2E4 1556 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 ELK3P41970 407 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 PEX5P50542 639 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 ZNF844Q08AG5 666 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 MGAT5Q09328 741 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 NFIL3Q16649 462 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 CENPLQ8N0S6 344 aaPredicted RBP14.35□□□□□ -0.11
PRKCB-201ENST00000303531 MIER2Q8N344 545 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 HIC2Q96JB3 615 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 SLCO1B7G3V0H7 640 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 ATP6V1G2O95670 118 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 RBP1P09455 135 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 PGBD3Q8N328 593 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 ZNF606Q8WXB4 792 aa14.35□□□□□ -0.11
PRKCB-201ENST00000303531 CES2O00748 559 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 SLITRK3O94933 977 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 SERPINB1P30740 379 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 SHMT1P34896 483 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 OXCT1P55809 520 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 TRIM69Q86WT6 500 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 KLHL4Q9C0H6 718 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 RARRES1P49788 294 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 EFEMP1Q12805 493 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 ERMARDQ5T6L9 678 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 IZUMO2Q6UXV1 221 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 USE1Q9NZ43 259 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 GPRC5DQ9NZD1 345 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 KIAA1210Q9ULL0 1709 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 KRT87PA6NCN2 255 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 PRR23D1E9PI22 279 aaPredicted RBP14.34□□□□□ -0.11
PRKCB-201ENST00000303531 DNALI1O14645 258 aaPredicted RBP14.34□□□□□ -0.11
PRKCB-201ENST00000303531 PRR23D2P0DMB1 279 aaPredicted RBP14.34□□□□□ -0.11
PRKCB-201ENST00000303531 TKTL1P51854 596 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 NCALDP61601 193 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 HASPINQ8TF76 798 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 SLC35C1Q96A29 364 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 RNF103O00237 685 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 MMRN1Q13201 1228 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 PWP1Q13610 501 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 CCDC92Q53HC0 331 aaPredicted RBP14.34□□□□□ -0.11
PRKCB-201ENST00000303531 MYO1HQ8N1T3 1032 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 SPIRE2Q8WWL2 714 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 CEP41Q9BYV8 373 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 UNKQ9C0B0 810 aaKnown RBP14.34□□□□□ -0.11
PRKCB-201ENST00000303531 RMND5AQ9H871 391 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 NT5MQ9NPB1 228 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 DDX3XO00571 662 aaKnown RBP eCLIP14.34□□□□□ -0.113e-20■■■■□ 20.3
PRKCB-201ENST00000303531 LRG1P02750 347 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 RARAP10276 462 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 MLNP12872 115 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 EPB42P16452 691 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 RGS2P41220 211 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 GLT1D1Q96MS3 346 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 BBS2Q9BXC9 721 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms