RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 DSEQ9UL01 958 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 E7ESA3 106 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 MGEA5O60502 916 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 ATP2C2O75185 946 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 GHRP10912 638 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 ODC1P11926 461 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 ELNP15502 786 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 NR2C2P49116 596 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 ACLYP53396 1101 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 ARL4CP56559 192 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 BCAR1P56945 870 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 ADIGQ0VDE8 80 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 KIAA0319Q5VV43 1072 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 DARS2Q6PI48 645 aaKnown RBP20.22■□□□□ 0.83
HOXC4-201ENST00000303406 TDRPQ86YL5 185 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 UHMK1Q8TAS1 419 aaKnown RBP20.22■□□□□ 0.83
HOXC4-201ENST00000303406 BCAS4Q8TDM0 211 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 MED10Q9BTT4 135 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 STAP1Q9ULZ2 295 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 AP4E1Q9UPM8 1137 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 NOD1Q9Y239 953 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 TSC2P49815 1807 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 C9IYK1 514 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 CDH16O75309 829 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 ACAT1P24752 427 aaKnown RBP20.22■□□□□ 0.83
HOXC4-201ENST00000303406 AIF1P55008 147 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 YWHAZP63104 245 aaKnown RBP20.22■□□□□ 0.83
HOXC4-201ENST00000303406 TUSC3Q13454 348 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 RASA2Q15283 850 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 CA9Q16790 459 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 FAM35AQ86V20 835 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 DEFB106AQ8N104 65 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 SIX6OS1Q8N1H7 587 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 MYCBPAPQ8TBZ2 947 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 PWWP2AQ96N64 755 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 NPY6RQ99463 290 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 FRMD8Q9BZ67 464 aaPredicted RBP20.22■□□□□ 0.83
HOXC4-201ENST00000303406 NRDE2Q9H7Z3 1164 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 CNGB3Q9NQW8 809 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 GPATCH2LQ9NWQ4 482 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 PAK5Q9P286 719 aa20.22■□□□□ 0.83
HOXC4-201ENST00000303406 E7EVH7 732 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 M0QZQ0 153 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 CYP2F1P24903 491 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 AFF1P51825 1210 aaKnown RBP20.21■□□□□ 0.83
HOXC4-201ENST00000303406 HIF1AQ16665 826 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 LONRF1Q17RB8 773 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 RAB41Q5JT25 222 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 PPP1R21Q6ZMI0 780 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 FAM43BQ6ZT52 329 aaPredicted RBP20.21■□□□□ 0.83
HOXC4-201ENST00000303406 ZNF598Q86UK7 904 aaKnown RBP20.21■□□□□ 0.83
HOXC4-201ENST00000303406 METTL23Q86XA0 190 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 CDKL3Q8IVW4 592 aaPredicted RBP20.21■□□□□ 0.83
HOXC4-201ENST00000303406 FAM71DQ8N9W8 422 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 C3orf58Q8NDZ4 430 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 CAPNS2Q96L46 248 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 C9orf72Q96LT7 481 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 ACBD6Q9BR61 282 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 KRT82Q9NSB4 513 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 DNAJC17Q9NVM6 304 aaKnown RBP20.21■□□□□ 0.83
HOXC4-201ENST00000303406 MTMR10Q9NXD2 777 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 EURLQ9NYK6 297 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 RRN3Q9NYV6 651 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 FETUBQ9UGM5 382 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 FZD10Q9ULW2 581 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 ACTL7BQ9Y614 415 aa20.21■□□□□ 0.83
HOXC4-201ENST00000303406 H7C0C1 242 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 CLDN5O00501 218 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 AOC2O75106 756 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 TFE3P19532 575 aaPredicted RBP20.2■□□□□ 0.82
HOXC4-201ENST00000303406 ATP5OP48047 213 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 SULT1E1P49888 294 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 IFI35P80217 286 aaPredicted RBP20.2■□□□□ 0.82
HOXC4-201ENST00000303406 DEFB115Q30KQ5 88 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 TIGD5Q53EQ6 642 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 TTC19Q6DKK2 380 aaPredicted RBP20.2■□□□□ 0.82
HOXC4-201ENST00000303406 NPNTQ6UXI9 565 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 ECHDC2Q86YB7 292 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 SCML4Q8N228 414 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 SLC9A7Q96T83 725 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 ADAM2Q99965 735 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 ADAM33Q9BZ11 813 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 USP29Q9HBJ7 922 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 POPDC2Q9HBU9 364 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 ZMYND8Q9ULU4 1186 aaPredicted RBP20.2■□□□□ 0.82
HOXC4-201ENST00000303406 SRCAPQ6ZRS2 3230 aa20.2■□□□□ 0.82
HOXC4-201ENST00000303406 SF3B1O75533 1304 aaKnown RBP eCLIP20.19■□□□□ 0.82
HOXC4-201ENST00000303406 COL4A4P53420 1690 aaPredicted RBP20.19■□□□□ 0.82
HOXC4-201ENST00000303406 CASTOR2A6NHX0 329 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 SMIM23A6NLE4 172 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 CHADO15335 359 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 TRAPPC3O43617 180 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 ZNF189O75820 626 aaPredicted RBP20.19■□□□□ 0.82
HOXC4-201ENST00000303406 AP1G2O75843 785 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 MAGEA6P43360 314 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 DAOAP59103 153 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 NR1H3Q13133 447 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 FAM171BQ6P995 826 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 BZW1Q7L1Q6 419 aaKnown RBP20.19■□□□□ 0.82
HOXC4-201ENST00000303406 SLC43A3Q8NBI5 491 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms