RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TTMPQ5BVD1 217 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 ANKRD20A8PQ5CZ79 823 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 SYPL2Q5VXT5 272 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 NPNTQ6UXI9 565 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 PQLC3Q8N755 202 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 SEPT8Q92599 483 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 NPY6RQ99463 290 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 AAASQ9NRG9 546 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 PCDHB7Q9Y5E2 793 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 SULT1E1P49888 294 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 ATN1P54259 1190 aaPredicted RBP23.23■■□□□ 1.31
SMAD1-201ENST00000302085 TFDP2Q14188 446 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 IZUMO3Q5VZ72 239 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 BNIPLQ7Z465 357 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 CCDC185Q8N715 623 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 GOLGA6L1Q8N7Z2 621 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 PABPC3Q9H361 631 aaKnown RBP23.23■■□□□ 1.31
SMAD1-201ENST00000302085 SEMA4AQ9H3S1 761 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 CNGB3Q9NQW8 809 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 CEP350Q5VT06 3117 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 YJEFN3A6XGL0 299 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 GOLGA8KD6RF30 607 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 E7ENQ6 273 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 USP17L7P0C7H9 530 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 CHKAP35790 457 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 GATMP50440 423 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 CAV1Q03135 178 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 TERF2Q15554 542 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 VSIG1Q86XK7 387 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 BBOF1Q8ND07 529 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 PCDH19Q8TAB3 1148 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 CCHCR1Q8TD31 782 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 FAM193BQ96PV7 902 aaPredicted RBP23.23■■□□□ 1.31
SMAD1-201ENST00000302085 ADAM7Q9H2U9 754 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 POPDC2Q9HBU9 364 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 MTMR10Q9NXD2 777 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 ADAM21Q9UKJ8 722 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 NAALADL1Q9UQQ1 740 aa23.23■■□□□ 1.31
SMAD1-201ENST00000302085 PRG3Q9Y2Y8 225 aaPredicted RBP23.23■■□□□ 1.31
SMAD1-201ENST00000302085 SGK1O00141 431 aa23.22■■□□□ 1.31
SMAD1-201ENST00000302085 RARGP13631 454 aa23.22■■□□□ 1.31
SMAD1-201ENST00000302085 MNX1P50219 401 aaPredicted RBP23.22■■□□□ 1.31
SMAD1-201ENST00000302085 EIF3EP60228 445 aaKnown RBP23.22■■□□□ 1.31
SMAD1-201ENST00000302085 YWHAHQ04917 246 aaPredicted RBP23.22■■□□□ 1.31
SMAD1-201ENST00000302085 ZNF844Q08AG5 666 aa23.22■■□□□ 1.31
SMAD1-201ENST00000302085 SLMAPQ14BN4 828 aa23.22■■□□□ 1.31
SMAD1-201ENST00000302085 P3H1Q32P28 736 aa23.22■■□□□ 1.31
SMAD1-201ENST00000302085 CEP85LQ5SZL2 805 aa23.22■■□□□ 1.31
SMAD1-201ENST00000302085 CTU1Q7Z7A3 348 aaKnown RBP23.22■■□□□ 1.31
SMAD1-201ENST00000302085 PLD5Q8N7P1 536 aa23.22■■□□□ 1.31
SMAD1-201ENST00000302085 FAF2Q96CS3 445 aa23.22■■□□□ 1.31
SMAD1-201ENST00000302085 SCLYQ96I15 445 aa23.22■■□□□ 1.31
SMAD1-201ENST00000302085 CASD1Q96PB1 797 aa23.22■■□□□ 1.31
SMAD1-201ENST00000302085 BRCA2P51587 3418 aa23.22■■□□□ 1.31
SMAD1-201ENST00000302085 TSPY1Q01534 308 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 DPYSL2Q16555 572 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 PPP6R3Q5H9R7 873 aaPredicted RBP23.21■■□□□ 1.31
SMAD1-201ENST00000302085 UBAP2Q5T6F2 1119 aaKnown RBP23.21■■□□□ 1.31
SMAD1-201ENST00000302085 HIBCHQ6NVY1 386 aaPredicted RBP23.21■■□□□ 1.31
SMAD1-201ENST00000302085 SLC39A5Q6ZMH5 540 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 BHLHA9Q7RTU4 235 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 DHX35Q9H5Z1 703 aaKnown RBP23.21■■□□□ 1.31
SMAD1-201ENST00000302085 AP4E1Q9UPM8 1137 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 TET1Q8NFU7 2136 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 OAZ2O95190 189 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 ZBED1O96006 694 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 GDF10P55107 478 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 MAPRE1Q15691 268 aaKnown RBP23.21■■□□□ 1.31
SMAD1-201ENST00000302085 SLC9A4Q6AI14 798 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 C1orf228Q6PIY5 440 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 FAM131BQ86XD5 332 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 UNC45BQ8IWX7 931 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 CRIPAKQ8N1N5 446 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 KCTD15Q96SI1 283 aaPredicted RBP23.21■■□□□ 1.31
SMAD1-201ENST00000302085 ZNF670Q9BS34 389 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 NRDE2Q9H7Z3 1164 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 FAM204AQ9H8W3 233 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 FZD10Q9ULW2 581 aa23.21■■□□□ 1.31
SMAD1-201ENST00000302085 ZNF487B1APH4 448 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 GPS1Q13098 491 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 NOMO1Q15155 1222 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 ANKRD33Q7Z3H0 272 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 CCDC25Q86WR0 208 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 ABI1Q8IZP0 508 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.2■■□□□ 1.3
SMAD1-201ENST00000302085 P3H4Q92791 437 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 APBB2Q92870 758 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 PWWP2AQ96N64 755 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 PCDH9Q9HC56 1237 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 DMAP1Q9NPF5 467 aaPredicted RBP23.2■■□□□ 1.3
SMAD1-201ENST00000302085 STAP1Q9ULZ2 295 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.2■■□□□ 1.3
SMAD1-201ENST00000302085 M0QYT0 321 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 DNALI1O14645 258 aaPredicted RBP23.2■■□□□ 1.3
SMAD1-201ENST00000302085 APOL1O14791 398 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 TADA2AO75478 443 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 IFNB1P01574 187 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 RBP3P10745 1247 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 CCL23P55773 120 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 PM20D1Q6GTS8 502 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms