RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 HAS3O00219 553 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 IL4RP24394 825 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 TKTP29401 623 aaKnown RBP22.84■■□□□ 1.25
TPM4-201ENST00000300933 SSTR1P30872 391 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 SDC4P31431 198 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 CPT1AP50416 773 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 GNASQ5JWF2 1037 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 FAXCQ5TGI0 409 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 COX16Q9P0S2 106 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 PIRO00625 290 aa22.83■■□□□ 1.25
TPM4-201ENST00000300933 OAS1P00973 400 aaKnown RBP22.83■■□□□ 1.25
TPM4-201ENST00000300933 BRAFP15056 766 aa22.83■■□□□ 1.25
TPM4-201ENST00000300933 BNIP1Q12981 228 aa22.83■■□□□ 1.25
TPM4-201ENST00000300933 EFTUD2Q15029 972 aaKnown RBP eCLIP22.83■■□□□ 1.254e-7■■■■□ 22.8
TPM4-201ENST00000300933 TAZQ16635 292 aa22.83■■□□□ 1.25
TPM4-201ENST00000300933 GALNTL6Q49A17 601 aa22.83■■□□□ 1.25
TPM4-201ENST00000300933 TRPV1Q8NER1 839 aa22.83■■□□□ 1.25
TPM4-201ENST00000300933 LPPQ93052 612 aa22.83■■□□□ 1.25
TPM4-201ENST00000300933 SLC4A5Q9BY07 1137 aa22.83■■□□□ 1.25
TPM4-201ENST00000300933 SNX25Q9H3E2 840 aa22.83■■□□□ 1.25
TPM4-201ENST00000300933 TIMM13Q9Y5L4 95 aaPredicted RBP22.83■■□□□ 1.25
TPM4-201ENST00000300933 H7C0C1 242 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 APOC4-APOC2K7ER74 178 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 SPAG7O75391 227 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 TMEM63AO94886 807 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 APOC2P02655 101 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 PCK1P35558 622 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 ATP5OP48047 213 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 HDAC4P56524 1084 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 ANKRD20A2Q5SQ80 823 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 ANKRD20A1Q5TYW2 823 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 ANKRD20A3Q5VUR7 823 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 C17orf99Q6UX52 265 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 TMEM110Q86TL2 294 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 LRRC52Q8N7C0 313 aa22.83■■□□□ 1.24
TPM4-201ENST00000300933 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.83■■□□□ 1.24
TPM4-201ENST00000300933 SNRNP25Q9BV90 132 aaKnown RBP22.83■■□□□ 1.24
TPM4-201ENST00000300933 SMNDC1O75940 238 aaKnown RBP eCLIP22.82■■□□□ 1.24
TPM4-201ENST00000300933 GCAP28676 217 aa22.82■■□□□ 1.24
TPM4-201ENST00000300933 PURAQ00577 322 aaKnown RBP22.82■■□□□ 1.24
TPM4-201ENST00000300933 MORF4L2Q15014 288 aa22.82■■□□□ 1.24
TPM4-201ENST00000300933 FAM47CQ5HY64 1035 aa22.82■■□□□ 1.24
TPM4-201ENST00000300933 RMDN2Q96LZ7 410 aa22.82■■□□□ 1.24
TPM4-201ENST00000300933 YIPF3Q9GZM5 350 aa22.82■■□□□ 1.24
TPM4-201ENST00000300933 STMN4Q9H169 189 aaPredicted RBP22.82■■□□□ 1.24
TPM4-201ENST00000300933 MCF2LO15068 1137 aa22.82■■□□□ 1.24
TPM4-201ENST00000300933 AVILO75366 819 aa22.82■■□□□ 1.24
TPM4-201ENST00000300933 ATP2A2P16615 1042 aaKnown RBP22.82■■□□□ 1.24
TPM4-201ENST00000300933 TRIM68Q6AZZ1 485 aa22.82■■□□□ 1.24
TPM4-201ENST00000300933 APBB1IPQ7Z5R6 666 aaPredicted RBP22.82■■□□□ 1.24
TPM4-201ENST00000300933 OSTM1Q86WC4 334 aa22.82■■□□□ 1.24
TPM4-201ENST00000300933 RSAD1Q9HA92 442 aa22.82■■□□□ 1.24
TPM4-201ENST00000300933 TMPRSS4Q9NRS4 437 aa22.82■■□□□ 1.24
TPM4-201ENST00000300933 DERAQ9Y315 318 aa22.82■■□□□ 1.24
TPM4-201ENST00000300933 BEST1O76090 585 aa22.81■■□□□ 1.24
TPM4-201ENST00000300933 LILRA4P59901 499 aa22.81■■□□□ 1.24
TPM4-201ENST00000300933 CRHR2Q13324 411 aa22.81■■□□□ 1.24
TPM4-201ENST00000300933 HIF1AQ16665 826 aa22.81■■□□□ 1.24
TPM4-201ENST00000300933 BBS9Q3SYG4 887 aa22.81■■□□□ 1.24
TPM4-201ENST00000300933 SPATA21Q7Z572 469 aa22.81■■□□□ 1.24
TPM4-201ENST00000300933 APPL2Q8NEU8 664 aa22.81■■□□□ 1.24
TPM4-201ENST00000300933 USP6NLQ92738 828 aa22.81■■□□□ 1.24
TPM4-201ENST00000300933 WDR83Q9BRX9 315 aaKnown RBP22.81■■□□□ 1.24
TPM4-201ENST00000300933 TRIM32Q13049 653 aa22.81■■□□□ 1.24
TPM4-201ENST00000300933 IFNL1Q8IU54 200 aa22.81■■□□□ 1.24
TPM4-201ENST00000300933 PCDH19Q8TAB3 1148 aa22.81■■□□□ 1.24
TPM4-201ENST00000300933 RNF157Q96PX1 679 aa22.81■■□□□ 1.24
TPM4-201ENST00000300933 ARHGEF3Q9NR81 526 aa22.81■■□□□ 1.24
TPM4-201ENST00000300933 FARP1Q9Y4F1 1045 aaPredicted RBP22.81■■□□□ 1.24
TPM4-201ENST00000300933 F5H423 210 aaPredicted RBP22.8■■□□□ 1.24
TPM4-201ENST00000300933 PTGESO14684 152 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 GPX6P59796 221 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 PITX1P78337 314 aaPredicted RBP22.8■■□□□ 1.24
TPM4-201ENST00000300933 PYROXD2Q8N2H3 581 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 PQLC3Q8N755 202 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 PLD5Q8N7P1 536 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 TTC13Q8NBP0 860 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 PAIP2Q9BPZ3 127 aaKnown RBP22.8■■□□□ 1.24
TPM4-201ENST00000300933 XPO7Q9UIA9 1087 aaKnown RBP22.8■■□□□ 1.24
TPM4-201ENST00000300933 EFR3BQ9Y2G0 817 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 RASA4BC9J798 803 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 RASA4O43374 803 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 RGS2P41220 211 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 NDUFV1P49821 464 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 WSCD1Q658N2 575 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 CENPUQ71F23 418 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 CTU1Q7Z7A3 348 aaKnown RBP22.8■■□□□ 1.24
TPM4-201ENST00000300933 ADGRF2Q8IZF7 708 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 DHX35Q9H5Z1 703 aaKnown RBP22.8■■□□□ 1.24
TPM4-201ENST00000300933 PCDH18Q9HCL0 1135 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 MFHAS1Q9Y4C4 1052 aa22.8■■□□□ 1.24
TPM4-201ENST00000300933 CDH16O75309 829 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 TAF6P49848 677 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 CRYBB1P53674 252 aaPredicted RBP22.79■■□□□ 1.24
TPM4-201ENST00000300933 CDC42EP1Q00587 391 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 ROR1Q01973 937 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 ACAP1Q15027 740 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 CROCCP2Q86T23 111 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 NAT8LQ8N9F0 302 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 RNF169Q8NCN4 708 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms